Pp3c2_34070V3.1 (ATPDR3, PDR3, Pp3c2_34070)

Aliases : ATPDR3, PDR3, Pp3c2_34070

Description : pleiotropic drug resistance 3

Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pp3c2_34070V3.1
Cluster	HCCA: Cluster_80

Target	Alias	Description	ECC score	Gene Family Method
Aspi01Gene28060.t1	ABCG40, PDR12,...	subfamily ABCG transporter & original description: none	0.01	OrthoFinder output from all 47 species
Cre12.g540650	ATPDR3, PDR3	Solute transport.primary active transport.ABC...	0.01	OrthoFinder output from all 47 species
GSVIVT01017202001	ABCG40, PDR12,...	Solute transport.primary active transport.ABC...	0.01	OrthoFinder output from all 47 species
Gb_17948	PDR4, ATPDR4	no hits & (original description: none)	0.01	OrthoFinder output from all 47 species
Msp_g03220	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.01	OrthoFinder output from all 47 species
Nbi_g04474	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.01	OrthoFinder output from all 47 species
Pp3c19_17390V3.1	PDR1, ATPDR1,...	pleiotropic drug resistance 1	0.01	OrthoFinder output from all 47 species
Ppi_g31992	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.01	OrthoFinder output from all 47 species
Smo412699	ABCG40, PDR12,...	Solute transport.primary active transport.ABC...	0.01	OrthoFinder output from all 47 species
Solyc09g042300.2.1	ATPDR3, PDR3,...	ABC transporter G family member 31 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Zm00001e026148_P001	PDR6, ATPDR6,...	subfamily ABCG transporter	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	IEP	HCCA
BP	GO:0006629	lipid metabolic process	IEP	HCCA
BP	GO:0009056	catabolic process	IEP	HCCA
BP	GO:0016042	lipid catabolic process	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
MF	GO:0030976	thiamine pyrophosphate binding	IEP	HCCA
MF	GO:0050997	quaternary ammonium group binding	IEP	HCCA
BP	GO:1901575	organic substance catabolic process	IEP	HCCA
MF	GO:1901681	sulfur compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013581	PDR_assoc	691	752
IPR013525	ABC_2_trans	1124	1337
IPR013525	ABC_2_trans	475	686
IPR029481	ABC_trans_N	53	113
IPR003439	ABC_transporter-like_ATP-bd	138	320
IPR003439	ABC_transporter-like_ATP-bd	827	979

External Links

No external refs found!