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  5. Pp3c2_31440V3.1

Pp3c2_31440V3.1 (ZOU, RGE1, Pp3c2_31440)


Aliases : ZOU, RGE1, Pp3c2_31440

Description : basic helix-loop-helix (bHLH) DNA-binding superfamily protein


Gene families : OG0000321 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000321_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c2_31440V3.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g017811 No alias bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g35008 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g39128 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g49839 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g02113 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15482 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g55561 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g12087 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11381 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11382 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g27104 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene01728.t1 Aspi01Gene01728 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene01729.t1 Aspi01Gene01729 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene17268.t1 Aspi01Gene17268 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene55519.t1 Aspi01Gene55519 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g009653 No alias bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Azfi_s0064.g035551 No alias bHLH-type transcription factor & original description: CDS=1-1050 0.03 OrthoFinder output from all 47 species
Azfi_s0185.g056674 No alias bHLH-type transcription factor & original description: CDS=1-1947 0.02 OrthoFinder output from all 47 species
Azfi_s0194.g057168 No alias bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Azfi_s0387.g067575 No alias bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Cba_g02950 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g03232 ZOU, RGE1 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06996 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g16575 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g16576 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g70328 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.07G032900.1 Ceric.07G032900 bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.09G089000.1 Ceric.09G089000 bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.29G028600.1 Ceric.29G028600 not classified & original description: pacid=50624922... 0.01 OrthoFinder output from all 47 species
Ceric.31G055400.1 Ceric.31G055400 bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g11590 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g14161 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g20358 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g33322 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g40604 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g28847 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g23361 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g38356 No alias bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g16061 ZOU, RGE1 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g21206 ZOU, RGE1 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g27912 No alias bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g48319 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g48632 ZOU, RGE1 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g12577 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g17853 ZOU, RGE1 bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g27743 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g63587 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000044 No alias not classified & original description: CDS=74-412 0.01 OrthoFinder output from all 47 species
Spa_g42092 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g53612 BIM2 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g02942 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g15370 EGL1, EGL3, ATMYC-2 bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g19439 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g42522 EGL1, EGL3, ATMYC-2 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g44871 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006555 methionine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008172 S-methyltransferase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009086 methionine biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 445 495
No external refs found!