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  5. Pp3c2_25620V3.1

Pp3c2_25620V3.1 (Pp3c2_25620)


Aliases : Pp3c2_25620

Description : nuclear transport factor 2B


Gene families : OG0001799 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001799_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c2_25620V3.1

Target Alias Description ECC score Gene Family Method Actions
AT1G27310 NTF2A nuclear transport factor 2A 0.02 OrthoFinder output from all 47 species
Als_g16788 NTF2A RanGDP-specific nuclear import factor *(NTF2) & original... 0.02 OrthoFinder output from all 47 species
Aob_g00910 NTF2A RanGDP-specific nuclear import factor *(NTF2) & original... 0.01 OrthoFinder output from all 47 species
Ehy_g13292 NTF2A RanGDP-specific nuclear import factor *(NTF2) & original... 0.02 OrthoFinder output from all 47 species
LOC_Os08g42000.1 NTF2A, LOC_Os08g42000 Nuclear transport factor 2 OS=Oryza sativa subsp.... 0.01 OrthoFinder output from all 47 species
MA_2789g0010 NTF2B Nuclear transport factor 2B OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Smo169222 NTF2B Nuclear transport factor 2B OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Smo230884 NTF2A Nuclear transport factor 2B OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Spa_g46972 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002075 NTF2_dom 7 120
No external refs found!