LOC_Os05g32370 (Os05g0389800)


Aliases : Os05g0389800

Description : 27.1.2 RNA.processing.RNA helicase Encodes a homolog of the yeast PRP2 protein, one of four related DEAH RNA helicases identified as essential cofactors for RNA splicing. ENHANCED SILENCING PHENOTYPE 3 (ESP3)


Gene families : OG_01_0000259 (Gene family) Phylogenetic Tree(s): OG0000259_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os05g32370
Cluster HCCA cluster: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021589.28 No alias 27.1 RNA.processing ATP-dependent RNA helicase, putative 0.01 Gene family
Cre24.g755347 No alias 27.1.2 RNA.processing.RNA helicase embryo defective 3011... 0.02 Gene family
MA_34468g0010 No alias 27.1.2 RNA.processing.RNA helicase RNA helicase family protein 0.02 Gene family
Solyc12g017700.2.1 Solyc12g017700.2 27.1.2 RNA.processing.RNA helicase Encodes a homolog of... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan
MF GO:0005524 ATP binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007502 Helicase-assoc_dom 881 969
IPR011709 DUF1605 1031 1108
IPR011545 DEAD/DEAH_box_helicase_dom 495 645
IPR001650 Helicase_C 695 819
No external refs found!