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  5. Pp3c2_10320V3.1

Pp3c2_10320V3.1 (Pp3c2_10320)


Aliases : Pp3c2_10320

Description : RmlC-like cupins superfamily protein


Gene families : OG0002091 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002091_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c2_10320V3.1
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
Cre16.g674964 No alias Pirin-like protein OS=Solanum lycopersicum 0.01 OrthoFinder output from all 47 species
Mp5g19670.1 No alias Pirin-like protein OS=Solanum lycopersicum... 0.02 OrthoFinder output from all 47 species
Msp_g39239 No alias transcriptional co-regulator *(Pirin) & original... 0.02 OrthoFinder output from all 47 species
Spa_g25433 No alias transcriptional co-regulator *(Pirin) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0008198 ferrous iron binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR008778 Pirin_C_dom 230 335
IPR003829 Pirin_N_dom 83 177
No external refs found!