Aliases : CLPR4, Pp3c26_8310
Description : CLP protease R subunit 4
Gene families : OG0000988 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000988_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00002p00194810 | CLPR4,... | Protein degradation.peptidase families.serine-type... | 0.01 | OrthoFinder output from all 47 species | |
AMTR_s00164p00068000 | CLPR1, SVR2,... | Protein degradation.peptidase families.serine-type... | 0.01 | OrthoFinder output from all 47 species | |
AT1G49970 | CLPR1, SVR2, NCLPP5 | CLP protease proteolytic subunit 1 | 0.01 | OrthoFinder output from all 47 species | |
Adi_g019566 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.01 | OrthoFinder output from all 47 species | |
Adi_g074670 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
Aev_g07767 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.01 | OrthoFinder output from all 47 species | |
Azfi_s0015.g013857 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.01 | OrthoFinder output from all 47 species | |
Cba_g15422 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00001420.2 | No alias | Protein degradation.peptidase families.serine-type... | 0.02 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00020952.49 | CLPR4 | Protein degradation.peptidase families.serine-type... | 0.01 | OrthoFinder output from all 47 species | |
Cre03.g204350 | CLPR4 | Protein degradation.peptidase families.serine-type... | 0.01 | OrthoFinder output from all 47 species | |
Cre07.g331500 | No alias | Protein degradation.peptidase families.serine-type... | 0.01 | OrthoFinder output from all 47 species | |
Cre14.g619100 | CLPR1, SVR2, NCLPP5 | Protein degradation.peptidase families.serine-type... | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g02591 | CLPR4 | non-proteolytic core component *(ClpR) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g11508 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.01 | OrthoFinder output from all 47 species | |
Dde_g03225 | CLPR4 | non-proteolytic core component *(ClpR) of chloroplast... | 0.01 | OrthoFinder output from all 47 species | |
Dde_g21817 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g18668 | CLPR4 | non-proteolytic core component *(ClpR) of chloroplast... | 0.01 | OrthoFinder output from all 47 species | |
GSVIVT01031146001 | No alias | Protein degradation.peptidase families.serine-type... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01037850001 | CLPR1, SVR2, NCLPP5 | Protein degradation.peptidase families.serine-type... | 0.01 | OrthoFinder output from all 47 species | |
LOC_Os03g22430.1 | LOC_Os03g22430 | non-proteolytic core component ClpR of chloroplast... | 0.01 | OrthoFinder output from all 47 species | |
MA_10429819g0020 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component ClpR of chloroplast... | 0.01 | OrthoFinder output from all 47 species | |
MA_6114g0010 | No alias | ATP-dependent Clp protease proteolytic subunit-related... | 0.01 | OrthoFinder output from all 47 species | |
Mp6g21300.1 | No alias | non-proteolytic core component ClpR of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
Mp7g03170.1 | CLPR4 | non-proteolytic core component ClpR of chloroplast... | 0.01 | OrthoFinder output from all 47 species | |
Pir_g11203 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.01 | OrthoFinder output from all 47 species | |
Pir_g12837 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0007.g003581 | CLPR4 | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0008.g004018 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0019.g007703 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
MF | GO:0004751 | ribose-5-phosphate isomerase activity | IEP | HCCA |
BP | GO:0006091 | generation of precursor metabolites and energy | IEP | HCCA |
BP | GO:0009052 | pentose-phosphate shunt, non-oxidative branch | IEP | HCCA |
MF | GO:0016853 | isomerase activity | IEP | HCCA |
MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
MF | GO:0016860 | intramolecular oxidoreductase activity | IEP | HCCA |
MF | GO:0016861 | intramolecular oxidoreductase activity, interconverting aldoses and ketoses | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR023562 | ClpP/TepA | 120 | 298 |
No external refs found! |