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  5. Pp3c25_1370V3.1

Pp3c25_1370V3.1 (Pp3c25_1370)


Aliases : Pp3c25_1370

Description : disease resistance protein (TIR-NBS-LRR class)


Gene families : OG0011264 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011264_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c25_1370V3.1

Target Alias Description ECC score Gene Family Method Actions
Pp3c10_19140V3.1 Pp3c10_19140 disease resistance protein (TIR-NBS-LRR class) 0.01 OrthoFinder output from all 47 species
Pp3c10_20780V3.1 Pp3c10_20780 disease resistance protein (TIR-NBS-LRR class) 0.05 OrthoFinder output from all 47 species
Pp3c14_8070V3.1 Pp3c14_8070 disease resistance protein (TIR-NBS-LRR class) 0.01 OrthoFinder output from all 47 species
Pp3c18_3160V3.1 Pp3c18_3160 No annotation 0.07 OrthoFinder output from all 47 species
Pp3c20_22240V3.1 Pp3c20_22240 disease resistance protein (TIR-NBS-LRR class) 0.05 OrthoFinder output from all 47 species
Pp3c20_23190V3.1 Pp3c20_23190 disease resistance protein (TIR-NBS-LRR class) 0.05 OrthoFinder output from all 47 species
Pp3c23_7327V3.1 Pp3c23_7327 Disease resistance protein (TIR-NBS-LRR class) family 0.06 OrthoFinder output from all 47 species
Pp3c2_17170V3.1 Pp3c2_17170 disease resistance protein (TIR-NBS-LRR class) 0.08 OrthoFinder output from all 47 species
Pp3c2_24770V3.1 Pp3c2_24770 disease resistance protein (TIR-NBS-LRR class) 0.02 OrthoFinder output from all 47 species
Pp3c2_2580V3.1 Pp3c2_2580 disease resistance protein (TIR-NBS-LRR class) 0.03 OrthoFinder output from all 47 species
Pp3c2_2600V3.1 Pp3c2_2600 No annotation 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA

No InterPro domains available for this sequence

No external refs found!