LOC_Os05g28350 (Os05g0351200)


Aliases : Os05g0351200

Description : 27.3.3 RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family Encodes a member of the DREB subfamily A-3 of ERF/AP2 transcription factor family (ABI4). The protein


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os05g28350

Target Alias Description ECC score Gene Family Method Actions
AT1G12890 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT2G40220 ABI4, SAN5,... Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G25390 SHN2 Integrase-type DNA-binding superfamily protein 0.01 Gene family
GSVIVT01006277001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
GSVIVT01014291001 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family
GSVIVT01028050001 No alias No description available 0.03 Gene family
LOC_Os01g21120 Os01g0313300 No description available 0.02 Gene family
LOC_Os05g29810 Os05g0361700 No description available 0.03 Gene family
LOC_Os05g39590 Os05g0473300 No description available 0.02 Gene family
LOC_Os05g41760 Os05g0497200 No description available 0.02 Gene family
LOC_Os07g22730 Os07g0410300 No description available 0.02 Gene family
LOC_Os09g11480 Os09g0287000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_15251g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
MA_168025g0010 No alias No description available 0.03 Gene family
MA_18454g0020 No alias No description available 0.02 Gene family
MA_19420g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
MA_214063g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Smo428344 PACid_15413251 No description available 0.01 Gene family
Solyc01g067540.1.1 Solyc01g067540.1 No description available 0.03 Gene family
Solyc06g050520.2.1 Solyc06g050520.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Solyc06g063070.3.1 Solyc06g063070.3 No description available 0.01 Gene family
Solyc09g075420.3.1 Solyc09g075420.3 No description available 0.03 Gene family
Zm00001d009103 GRMZM2G053503 No description available 0.06 Gene family
Zm00001d022461 GRMZM2G025062 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d022488 GRMZM2G307119 No description available 0.04 Gene family
Zm00001d027686 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d027924 GRMZM2G129674 No description available 0.03 Gene family
Zm00001d030513 GRMZM2G039870 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
Zm00001d036889 GRMZM2G106591 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d038001 GRMZM2G093595 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
Zm00001d039019 GRMZM2G317596 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family
Zm00001d040651 GRMZM2G169382 No description available 0.04 Gene family
Zm00001d046501 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.01 Gene family
Zm00001d052365 GRMZM2G060465 No description available 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 49 97
No external refs found!