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Aliases : Pp3c24_9260
Description : expansin A1
Gene families : OG0000032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00110p00101270 | ATEXPA1, EXP1,... | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.01 | OrthoFinder output from all 47 species | |
| AMTR_s00119p00058870 | ATEXPA1, EXP1,... | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.01 | OrthoFinder output from all 47 species | |
| Ala_g20858 | ATEXPA10,... | alpha-class expansin & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ala_g23921 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Als_g47332 | EXPB3, ATEXPB3,... | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aop_g12780 | ATEXPA10,... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g13340 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aop_g21880 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g21881 | ATEXPA11, ATHEXP... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g33546 | ATEXPA1, EXP1,... | alpha-class expansin & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aop_g35329 | ATEXPA10,... | alpha-class expansin & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aop_g36017 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g36019 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aop_g44449 | ATEXPA10,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene03749.t1 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene03750.t1 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene03751.t1 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene03879.t1 | ATEXPA10,... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene14796.t1 | ATEXPA10,... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene40354.t1 | EXPA2, ATHEXP... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene58043.t1 | ATEXPA10,... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0291.g063336 | ATEXPA10,... | alpha-class expansin & original description: CDS=142-915 | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.05G087800.1 | ATEXPA10,... | alpha-class expansin & original description:... | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.17G039400.1 | EXP15, ATEXPA15,... | alpha-class expansin & original description:... | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.17G039500.1 | EXP15, ATEXPA15,... | alpha-class expansin & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g07647 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g08720 | ATEXPA10,... | alpha-class expansin & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g13325 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g15611 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g22602 | ATEXPA10,... | alpha-class expansin & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g23607 | ATEXPA10,... | alpha-class expansin & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g23608 | ATEXPA10,... | alpha-class expansin & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g26026 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01028215001 | ATHEXP ALPHA... | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.02 | OrthoFinder output from all 47 species | |
| Gb_09118 | No alias | alpha-class expansin | 0.03 | OrthoFinder output from all 47 species | |
| Gb_16008 | EXP15, ATEXPA15,... | alpha-class expansin | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g14650.1 | ATEXPA1, EXP1,... | alpha-class expansin | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g16800.1 | ATEXPA11, ATHEXP... | alpha-class expansin | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g21820.1 | EXPA8, ATHEXP... | alpha-class expansin | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os03g25990.1 | EXP15, ATEXPA15,... | alpha-class expansin | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os10g40710.1 | ATHEXP BETA 1.4,... | Expansin-B2 OS=Oryza sativa subsp. japonica... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g11130 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Len_g18380 | ATEXPA11, ATHEXP... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g36480 | ATEXPA1, EXP1,... | alpha-class expansin & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Len_g40469 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g46726 | ATEXPA10,... | alpha-class expansin & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Len_g54462 | ATEXPA1, EXP1,... | alpha-class expansin & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Len_g59336 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| MA_10299189g0010 | EXPA8, ATHEXP... | Expansin-A8 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| MA_2687768g0010 | EXPA8, ATHEXP... | alpha-class expansin | 0.01 | OrthoFinder output from all 47 species | |
| MA_30127g0010 | EXPA8, ATHEXP... | alpha-class expansin | 0.01 | OrthoFinder output from all 47 species | |
| MA_36587g0010 | EXPA8, ATHEXP... | alpha-class expansin | 0.01 | OrthoFinder output from all 47 species | |
| Mp1g22740.1 | ATEXPA1, EXP1,... | alpha-class expansin | 0.02 | OrthoFinder output from all 47 species | |
| Mp1g26350.1 | ATEXP14, EXPA14,... | alpha-class expansin | 0.01 | OrthoFinder output from all 47 species | |
| Mp2g18600.1 | ATEXPA4, ATEXP4,... | alpha-class expansin | 0.01 | OrthoFinder output from all 47 species | |
| Mp3g09650.1 | EXPA6, ATEXP6,... | alpha-class expansin | 0.02 | OrthoFinder output from all 47 species | |
| Mp3g09750.1 | ATEXPA1, EXP1,... | alpha-class expansin | 0.02 | OrthoFinder output from all 47 species | |
| Mp3g12280.1 | ATEXPA3, EXP3,... | alpha-class expansin | 0.02 | OrthoFinder output from all 47 species | |
| Mp5g01930.1 | EXPA6, ATEXP6,... | alpha-class expansin | 0.01 | OrthoFinder output from all 47 species | |
| Mp8g18860.1 | ATEXPA4, ATEXP4,... | alpha-class expansin | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g12780 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g43362 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Nbi_g06079 | ATEXPA10,... | alpha-class expansin & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Nbi_g08930 | EXPB1, ATEXPB1,... | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Nbi_g09043 | ATEXPA10,... | alpha-class expansin & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Nbi_g16629 | ATEXPA10,... | alpha-class expansin & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ore_g07848 | ATEXPA10,... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g07849 | ATEXPA10,... | alpha-class expansin & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ore_g32683 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0015.g006532 | ATEXPA10,... | not classified & original description: CDS=836-1285 | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0103.g019980 | ATEXPA4, ATEXP4,... | alpha-class expansin & original description: CDS=1-819 | 0.01 | OrthoFinder output from all 47 species | |
| Smo102623 | ATEXPA10,... | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.01 | OrthoFinder output from all 47 species | |
| Smo419575 | EXPA16, ATHEXP... | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g54039 | ATEXPA1, EXP1,... | alpha-class expansin & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Tin_g03794 | EXPA16, ATHEXP... | alpha-class expansin & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e002274_P001 | ATHEXP BETA 1.4,... | Expansin-B9 OS=Zea mays (sp|q07154|expb9_maize : 343.0) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e002335_P001 | ATHEXP BETA 1.4,... | Expansin-B3 OS=Oryza sativa subsp. japonica... | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e004716_P001 | ATEXPA11, ATHEXP... | alpha-class expansin | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e015337_P001 | ATHEXP BETA 1.1,... | Expansin-B11 OS=Oryza sativa subsp. japonica... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e017221_P001 | ATEXPA1, EXP1,... | alpha-class expansin | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e033407_P001 | ATHEXP BETA 1.1,... | Expansin-B11 OS=Oryza sativa subsp. japonica... | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e036860_P001 | ATHEXP BETA 1.4,... | Putative expansin-B14 OS=Oryza sativa subsp. japonica... | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e036907_P001 | ATHEXP BETA 1.4,... | Putative expansin-B14 OS=Oryza sativa subsp. japonica... | 0.01 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
| MF | GO:0045735 | nutrient reservoir activity | IEP | HCCA |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR007117 | Expansin_CBD | 21 | 96 |
| No external refs found! |