Pp3c24_8160V3.1 (Pp3c24_8160)

Aliases : Pp3c24_8160

Description : Ribosomal protein S21e

Gene families : OG0004049 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004049_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pp3c24_8160V3.1
Cluster	HCCA: Cluster_82

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00016p00256280	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.small subunit...	0.04	OrthoFinder output from all 47 species
AMTR_s00045p00200410	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.small subunit...	0.02	OrthoFinder output from all 47 species
AT3G53890	No alias	Ribosomal protein S21e	0.04	OrthoFinder output from all 47 species
AT5G27700	No alias	Ribosomal protein S21e	0.02	OrthoFinder output from all 47 species
Azfi_s2932.g113764	No alias	component *(eS21) of small ribosomal-subunit (SSU)...	0.01	OrthoFinder output from all 47 species
Cba_g37485	No alias	component *(eS21) of small ribosomal-subunit (SSU)...	0.01	OrthoFinder output from all 47 species
Ceric.37G056600.1	Ceric.37G056600	component *(eS21) of small ribosomal-subunit (SSU)...	0.07	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020780.14	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.03	OrthoFinder output from all 47 species
Cre03.g203450	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.03	OrthoFinder output from all 47 species
Dcu_g35214	No alias	component *(eS21) of small ribosomal-subunit (SSU)...	0.01	OrthoFinder output from all 47 species
Dde_g15855	No alias	component *(eS21) of small ribosomal-subunit (SSU)...	0.02	OrthoFinder output from all 47 species
GSVIVT01017756001	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.02	OrthoFinder output from all 47 species
GSVIVT01031151001	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.04	OrthoFinder output from all 47 species
Gb_27652	No alias	component RPS21 of SSU proteome	0.02	OrthoFinder output from all 47 species
Gb_35516	No alias	component RPS21 of SSU proteome	0.03	OrthoFinder output from all 47 species
LOC_Os03g46490.1	LOC_Os03g46490	component RPS21 of SSU proteome	0.01	OrthoFinder output from all 47 species
Lfl_g13374	No alias	component *(eS21) of small ribosomal-subunit (SSU)...	0.02	OrthoFinder output from all 47 species
MA_73657g0010	No alias	component RPS21 of SSU proteome	0.02	OrthoFinder output from all 47 species
Mp4g22150.1	No alias	component RPS21 of SSU proteome	0.05	OrthoFinder output from all 47 species
Sam_g07802	No alias	component *(eS21) of small ribosomal-subunit (SSU)...	0.01	OrthoFinder output from all 47 species
Sam_g07803	No alias	component *(eS21) of small ribosomal-subunit (SSU)...	0.01	OrthoFinder output from all 47 species
Sam_g40421	No alias	component *(eS21) of small ribosomal-subunit (SSU)...	0.02	OrthoFinder output from all 47 species
Solyc01g066840.3.1	Solyc01g066840	component RPS21 of SSU proteome	0.02	OrthoFinder output from all 47 species
Solyc04g074910.3.1	Solyc04g074910	component RPS21 of SSU proteome	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001931	Ribosomal_S21e	32	91

External Links

No external refs found!

Pp3c24_8160V3.1 (Pp3c24_8160)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation