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  5. Pp3c24_7770V3.1

Pp3c24_7770V3.1 (Pp3c24_7770)


Aliases : Pp3c24_7770

Description : hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein


Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c24_7770V3.1
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00162990 evm_27.TU.AmTr_v1... Nutrient uptake.iron uptake.regulation.IDF1 IRT1-ubiquitin ligase 0.02 OrthoFinder output from all 47 species
Adi_g026101 ATRING1, RING1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g03039 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Als_g04682 RHA3A not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.18G040500.1 Ceric.18G040500 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Dde_g07621 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Ehy_g08872 ATL2, TL2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_159453g0010 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Msp_g04081 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05611 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g26349 ATL3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g08523 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Tin_g12002 BRH1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e007208_P002 Zm00001e007208 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR024766 Znf_RING_H2 13 50
No external refs found!