Pp3c24_18820V3.1 (MURE, PDE316, ATMURE,...)

Aliases : MURE, PDE316, ATMURE, Pp3c24_18820

Description : acid-amino acid ligases;ligases;ATP binding;ATP binding;ligases

Gene families : OG0004194 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004194_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pp3c24_18820V3.1
Cluster	HCCA: Cluster_101

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00009p00236210	MURE, PDE316,...	RNA biosynthesis.organelle machineries.RNA polymerase...	0.02	OrthoFinder output from all 47 species
AT1G63680	MURE, PDE316, ATMURE	acid-amino acid ligases;ligases;ATP binding;ATP binding;ligases	0.02	OrthoFinder output from all 47 species
Azfi_s0008.g011499	MURE, PDE316, ATMURE	cofactor of plastid-encoded RNA polymerase *(PAP11/MURE)...	0.01	OrthoFinder output from all 47 species
Ceric.37G004600.1	MURE, PDE316,...	cofactor of plastid-encoded RNA polymerase *(PAP11/MURE)...	0.03	OrthoFinder output from all 47 species
Dac_g02352	MURE, PDE316, ATMURE	cofactor of plastid-encoded RNA polymerase *(PAP11/MURE)...	0.01	OrthoFinder output from all 47 species
Mp6g20740.1	MURE, PDE316, ATMURE	PAP11/MURE cofactor of plastid-encoded RNA polymerase	0.02	OrthoFinder output from all 47 species
Ore_g33830	MURE, PDE316, ATMURE	cofactor of plastid-encoded RNA polymerase *(PAP11/MURE)...	0.02	OrthoFinder output from all 47 species
Solyc08g081170.4.1	MURE, PDE316,...	PAP11/MURE cofactor of plastid-encoded RNA polymerase	0.02	OrthoFinder output from all 47 species
Zm00001e037912_P001	MURE, PDE316,...	PAP11/MURE cofactor of plastid-encoded RNA polymerase	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	IEA	Interproscan
MF	GO:0016874	ligase activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR004101	Mur_ligase_C	627	710
IPR013221	Mur_ligase_cen	401	606
IPR000713	Mur_ligase_N	314	389

External Links

No external refs found!