LOC_Os05g25260 (Os05g0316800)


Aliases : Os05g0316800

Description : No description available


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os05g25260
Cluster HCCA cluster: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
AT1G06160 ORA59 octadecanoid-responsive Arabidopsis AP2/ERF 59 0.03 Gene family
AT1G71520 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT1G78080 RAP2.4 related to AP2 4 0.02 Gene family
AT3G23230 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT4G16750 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT4G17500 ERF-1, ATERF-1 ethylene responsive element binding factor 1 0.02 Gene family
AT4G39780 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G07310 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G07580 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT5G61600 ERF104 ethylene response factor 104 0.05 Gene family
AT5G61890 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G67190 DEAR2 DREB and EAR motif protein 2 0.05 Gene family
Cre08.g364400 No alias No description available 0.01 Gene family
GSVIVT01001089001 No alias No description available 0.03 Gene family
GSVIVT01013917001 No alias No description available 0.03 Gene family
GSVIVT01013918001 No alias No description available 0.04 Gene family
GSVIVT01019519001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
GSVIVT01028050001 No alias No description available 0.04 Gene family
GSVIVT01032983001 No alias No description available 0.02 Gene family
GSVIVT01035098001 No alias No description available 0.02 Gene family
GSVIVT01035852001 No alias No description available 0.03 Gene family
LOC_Os02g06330 No alias No description available 0.03 Gene family
LOC_Os02g43790 Os02g0654700 No description available 0.02 Gene family
LOC_Os05g41780 Os05g0497300 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
LOC_Os09g11480 Os09g0287000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
MA_116185g0010 No alias No description available 0.03 Gene family
MA_168025g0010 No alias No description available 0.02 Gene family
MA_203191g0010 No alias No description available 0.03 Gene family
MA_3073g0010 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
MA_3405g0010 No alias No description available 0.03 Gene family
MA_364562g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
MA_4032g0010 No alias No description available 0.02 Gene family
MA_426919g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_446533g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
MA_83118g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
MA_8384767g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_84578g0010 No alias No description available 0.02 Gene family
MA_96512g0020 No alias No description available 0.02 Gene family
Smo73155 PACid_15404551 No description available 0.02 Gene family
Solyc01g090320.3.1 Solyc01g090320.3 No description available 0.03 Gene family
Solyc02g093130.2.1 Solyc02g093130.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Solyc03g093540.1.1 Solyc03g093540.1 No description available 0.02 Gene family
Solyc03g093560.1.1 Solyc03g093560.1 No description available 0.03 Gene family
Solyc04g071770.3.1 Solyc04g071770.3 No description available 0.03 Gene family
Solyc05g013540.1.1 Solyc05g013540.1 No description available 0.03 Gene family
Solyc06g063070.3.1 Solyc06g063070.3 No description available 0.03 Gene family
Solyc06g082590.1.1 Solyc06g082590.1 No description available 0.03 Gene family
Solyc08g078190.1.1 Solyc08g078190.1 No description available 0.05 Gene family
Solyc10g006130.1.1 Solyc10g006130.1 No description available 0.02 Gene family
Solyc11g042560.1.1 Solyc11g042560.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc12g008350.2.1 Solyc12g008350.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Zm00001d000339 GRMZM2G174347 No description available 0.05 Gene family
Zm00001d001907 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d012585 GRMZM2G132185 17.5.2 hormone metabolism.ethylene.signal transduction... 0.06 Gene family
Zm00001d017462 GRMZM2G466044 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d023535 GRMZM2G544539 No description available 0.03 Gene family
Zm00001d026271 GRMZM2G438202 No description available 0.07 Gene family
Zm00001d026563 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d027686 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d029679 GRMZM2G477287 No description available 0.02 Gene family
Zm00001d032077 GRMZM2G163745 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d032295 GRMZM2G061487 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.07 Gene family
Zm00001d036251 GRMZM2G328197 No description available 0.03 Gene family
Zm00001d037941 GRMZM2G085964 No description available 0.03 Gene family
Zm00001d038585 GRMZM2G020150 No description available 0.02 Gene family
Zm00001d039077 GRMZM5G846057 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
Zm00001d039324 GRMZM2G142179 No description available 0.03 Gene family
Zm00001d042588 GRMZM2G105266 No description available 0.02 Gene family
Zm00001d043205 GRMZM2G310368 17.5.2 hormone metabolism.ethylene.signal transduction... 0.06 Gene family
Zm00001d046292 GRMZM2G073047 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d048208 GRMZM2G113060 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d049364 GRMZM2G089995 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family
Zm00001d051239 GRMZM2G300924 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.06 Gene family
Zm00001d051340 GRMZM2G319786 No description available 0.04 Gene family
Zm00001d052026 GRMZM2G111415 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family
Zm00001d052229 GRMZM2G029323 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d052365 GRMZM2G060465 No description available 0.04 Gene family
Zm00001d053859 GRMZM2G052720 No description available 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 97 146
No external refs found!