1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c23_13320V3.1

Pp3c23_13320V3.1 (Pp3c23_13320)


Aliases : Pp3c23_13320

Description : NADH-ubiquinone oxidoreductase-related


Gene families : OG0005926 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005926_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c23_13320V3.1
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AT3G03070 No alias NADH-ubiquinone oxidoreductase-related 0.06 OrthoFinder output from all 47 species
Azfi_s0264.g060910 No alias non-core component *(NDUFS6/13kDa) of NADH dehydrogenase... 0.02 OrthoFinder output from all 47 species
Cba_g02908 No alias non-core component *(NDUFS6/13kDa) of NADH dehydrogenase... 0.02 OrthoFinder output from all 47 species
Ceric.06G072600.1 Ceric.06G072600 non-core component *(NDUFS6/13kDa) of NADH dehydrogenase... 0.03 OrthoFinder output from all 47 species
Gb_15747 No alias non-core component NduFS6 of NADH dehydrogenase 0.03 OrthoFinder output from all 47 species
LOC_Os08g06430.1 LOC_Os08g06430 non-core component NduFS6 of NADH dehydrogenase 0.02 OrthoFinder output from all 47 species
Nbi_g02528 No alias non-core component *(NDUFS6/13kDa) of NADH dehydrogenase... 0.03 OrthoFinder output from all 47 species
Solyc03g097010.3.1 Solyc03g097010 non-core component NduFS6 of NADH dehydrogenase 0.02 OrthoFinder output from all 47 species
Spa_g00505 No alias non-core component *(NDUFS6/13kDa) of NADH dehydrogenase... 0.02 OrthoFinder output from all 47 species
Tin_g37864 No alias non-core component *(NDUFS6/13kDa) of NADH dehydrogenase... 0.01 OrthoFinder output from all 47 species
Zm00001e021694_P001 Zm00001e021694 non-core component NduFS6 of NADH dehydrogenase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000782 telomere cap complex IEP HCCA
CC GO:0000783 nuclear telomere cap complex IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005787 signal peptidase complex IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0007021 tubulin complex assembly IEP HCCA
BP GO:0007023 post-chaperonin tubulin folding pathway IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
MF GO:0048487 beta-tubulin binding IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1990879 CST complex IEP HCCA
InterPro domains Description Start Stop
IPR019401 Znf_CHCC 90 126
No external refs found!