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  5. LOC_Os05g23670

LOC_Os05g23670 (Os05g0302300)


Aliases : Os05g0302300

Description : 27.3.57 RNA.regulation of transcription.JUMONJI family Encodes a histone H3K4 demethylase repressing floral transition. JUMONJI 14 (JMJ14)


Gene families : OG_01_0001278 (Gene family) Phylogenetic Tree(s): OG0001278_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os05g23670
Cluster HCCA cluster: Cluster_189

Target Alias Description ECC score Gene Family Method Actions
AT1G08620 PKDM7D Transcription factor jumonji (jmj) family protein / zinc... 0.02 Gene family
AT1G30810 No alias Transcription factor jumonji (jmj) family protein / zinc... 0.04 Gene family
AT2G38950 No alias Transcription factor jumonji (jmj) family protein / zinc... 0.06 Gene family
GSVIVT01023517001 No alias 27.3.57 RNA.regulation of transcription.JUMONJI family PKDM7D 0.02 Gene family
Solyc02g069740.3.1 Solyc02g069740.3 No description available 0.03 Gene family
Zm00001d018647 GRMZM2G108589 No description available 0.03 Gene family

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004198 Znf_C5HC2 539 590
IPR003888 FYrich_N 772 819
IPR003889 FYrich_C 826 910
IPR003349 JmjN 77 110
IPR003347 JmjC_dom 318 434
No external refs found!