1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c22_22810V3.1

Pp3c22_22810V3.1 (Pp3c22_22810)


Aliases : Pp3c22_22810

Description : zinc ion binding;nucleic acid binding


Gene families : OG0011936 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011936_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c22_22810V3.1
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
Pp3c14_8160V3.1 Pp3c14_8160 No annotation 0.03 OrthoFinder output from all 47 species
Pp3c4_20055V3.1 Pp3c4_20055 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c6_4640V3.1 Pp3c6_4640 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c7_24920V3.1 Pp3c7_24920 No annotation 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006313 transposition, DNA-mediated IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0015074 DNA integration IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0032196 transposition IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR025558 DUF4283 88 213
No external refs found!