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  5. Pp3c21_8750V3.1

Pp3c21_8750V3.1 (Pp3c21_8750)


Aliases : Pp3c21_8750

Description : VH1-interacting kinase


Gene families : OG0001630 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001630_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c21_8750V3.1

Target Alias Description ECC score Gene Family Method Actions
Pp3c11_21080V3.1 Pp3c11_21080 Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
Pp3c12_3820V3.1 Pp3c12_3820 Protein kinase family protein 0.02 OrthoFinder output from all 47 species
Pp3c14_12470V3.1 Pp3c14_12470 MAPK/ERK kinase kinase 3 0.03 OrthoFinder output from all 47 species
Pp3c17_21566V3.1 Pp3c17_21566 Protein kinase superfamily protein 0.03 OrthoFinder output from all 47 species
Pp3c25_5920V3.1 Pp3c25_5920 Disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
Pp3c3_11530V3.1 Pp3c3_11530 disease resistance protein (TIR-NBS-LRR class) 0.03 OrthoFinder output from all 47 species
Pp3c8_2160V3.1 ATWNK2, WNK2,... mitogen-activated protein kinase kinase 4 0.03 OrthoFinder output from all 47 species
Pp3c9_1270V3.1 Pp3c9_1270 No annotation 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006468 protein phosphorylation IEA Interproscan
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000719 Prot_kinase_dom 230 458
IPR002182 NB-ARC 519 731
No external refs found!