1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c21_5650V3.1

Pp3c21_5650V3.1 (PETB, Pp3c21_5650)


Aliases : PETB, Pp3c21_5650

Description : photosynthetic electron transfer B


Gene families : OG0004191 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004191_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c21_5650V3.1

Target Alias Description ECC score Gene Family Method Actions
ATCG00680 PSBB photosystem II reaction center protein B 0.04 OrthoFinder output from all 47 species
Aev_g08305 PSBB component *(PsbB/CP47) of PS-II reaction center complex... 0.03 OrthoFinder output from all 47 species
Ceric.05G041400.1 PSBB, Ceric.05G041400 component *(PsbB/CP47) of PS-II reaction center complex... 0.02 OrthoFinder output from all 47 species
Ceric.14G009600.1 PSBB, Ceric.14G009600 not classified & original description: pacid=50634641... 0.03 OrthoFinder output from all 47 species
Ceric.1Z019400.1 PSBB, Ceric.1Z019400 component *(PsbB/CP47) of PS-II reaction center complex... 0.02 OrthoFinder output from all 47 species
Ceric.38G008000.1 PSBB, Ceric.38G008000 component *(PsbB/CP47) of PS-II reaction center complex... 0.02 OrthoFinder output from all 47 species
Gb_23567 PSBB component PsbB/CP47 of PS-II reaction center complex 0.01 OrthoFinder output from all 47 species
Gb_27294 PSBB Photosystem II CP47 reaction center protein OS=Cycas... 0.01 OrthoFinder output from all 47 species
LOC_Os06g39708.1 PSBB, LOC_Os06g39708 component PsbB/CP47 of PS-II reaction center complex 0.02 OrthoFinder output from all 47 species
LOC_Os09g04680.1 PSBB, LOC_Os09g04680 Photosystem II CP47 reaction center protein OS=Oryza... 0.02 OrthoFinder output from all 47 species
LOC_Os10g21310.1 PSBB, LOC_Os10g21310 component PsbB/CP47 of PS-II reaction center complex 0.02 OrthoFinder output from all 47 species
MA_4447313g0010 PSBB Photosystem II CP47 reaction center protein OS=Pinus... 0.02 OrthoFinder output from all 47 species
Mpzg01020.1 PSBB component PsbB/CP47 of PS-II reaction center complex 0.03 OrthoFinder output from all 47 species
Ore_g02100 PSBB component *(PsbB/CP47) of PS-II reaction center complex... 0.04 OrthoFinder output from all 47 species
Sam_g10281 No alias component *(PsbB/CP47) of PS-II reaction center complex... 0.02 OrthoFinder output from all 47 species
Smo137729 PSBB Photosystem II CP47 reaction center protein OS=Angiopteris evecta 0.05 OrthoFinder output from all 47 species
Solyc00g500024.1.1 PSBB, Solyc00g500024 component PsbB/CP47 of PS-II reaction center complex 0.02 OrthoFinder output from all 47 species
Solyc00g500071.1.1 PSBB, Solyc00g500071 component PsbB/CP47 of PS-II reaction center complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEA Interproscan
CC GO:0009521 photosystem IEA Interproscan
BP GO:0009767 photosynthetic electron transport chain IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016168 chlorophyll binding IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0019684 photosynthesis, light reaction IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005797 Cyt_b/b6_N 154 309
IPR000932 PS_antenna-like 1 117
No external refs found!