LOC_Os05g19380 (Os05g0275000)


Aliases : Os05g0275000

Description : 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0003255 (Gene family) Phylogenetic Tree(s): OG0003255_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os05g19380
Cluster HCCA cluster: Cluster_223

Target Alias Description ECC score Gene Family Method Actions
AT5G02860 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Gene family
GSVIVT01029248001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.08 Gene family
MA_6146g0010 No alias No description available 0.02 Gene family
MA_71865g0010 No alias No description available 0.02 Gene family
MA_96691g0010 No alias No description available 0.03 Gene family
Solyc07g017760.1.1 Solyc07g017760.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Zm00001d036698 GRMZM2G177169 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 704 753
IPR002885 Pentatricopeptide_repeat 354 401
IPR002885 Pentatricopeptide_repeat 494 543
IPR002885 Pentatricopeptide_repeat 284 325
IPR002885 Pentatricopeptide_repeat 424 471
IPR002885 Pentatricopeptide_repeat 175 227
IPR002885 Pentatricopeptide_repeat 589 647
IPR002885 Pentatricopeptide_repeat 253 281
IPR002885 Pentatricopeptide_repeat 667 697
No external refs found!