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  5. Pp3c20_9790V3.1

Pp3c20_9790V3.1 (emb2746, Pp3c20_9790)


Aliases : emb2746, Pp3c20_9790

Description : RNA-metabolising metallo-beta-lactamase family protein


Gene families : OG0003970 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003970_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c20_9790V3.1
Cluster HCCA: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
AT5G63420 emb2746 RNA-metabolising metallo-beta-lactamase family protein 0.04 OrthoFinder output from all 47 species
Aspi01Gene13679.t1 emb2746, Aspi01Gene13679 exoribonuclease *(RNase J) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G090000.1 emb2746, Ceric.02G090000 exoribonuclease *(RNase J) & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g22106 emb2746 exoribonuclease *(RNase J) & original description: none 0.02 OrthoFinder output from all 47 species
Mp3g10830.1 emb2746 exo-/endoribonuclease (RNase J) 0.01 OrthoFinder output from all 47 species
Msp_g15010 emb2746 exoribonuclease *(RNase J) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g111260.3.1 emb2746, Solyc03g111260 exo-/endoribonuclease (RNase J) 0.02 OrthoFinder output from all 47 species
Spa_g18551 emb2746 exoribonuclease *(RNase J) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e013900_P001 emb2746, Zm00001e013900 exo-/endoribonuclease (RNase J) 0.04 OrthoFinder output from all 47 species
Zm00001e025070_P003 emb2746, Zm00001e025070 exo-/endoribonuclease (RNase J) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
InterPro domains Description Start Stop
IPR001279 Metallo-B-lactamas 130 264
IPR011108 RMMBL 460 500
No external refs found!