Pp3c20_8550V3.1 (Pp3c20_8550)


Aliases : Pp3c20_8550

Description : Histone superfamily protein


Gene families : OG0000128 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000128_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c20_8550V3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00225p00023630 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from all 47 species
AT4G40040 No alias Histone superfamily protein 0.03 OrthoFinder output from all 47 species
Ala_g26587 No alias histone *(H3) & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g33085 No alias histone *(H3) & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.06G075200.1 Ceric.06G075200 histone *(H3) & original description: pacid=50619967... 0.02 OrthoFinder output from all 47 species
Ceric.10G015500.1 Ceric.10G015500 histone *(H3) & original description: pacid=50612308... 0.02 OrthoFinder output from all 47 species
Ceric.12G022300.1 Ceric.12G022300 histone *(H3) & original description: pacid=50601599... 0.02 OrthoFinder output from all 47 species
Ceric.14G025000.1 Ceric.14G025000 histone *(H3) & original description: pacid=50634383... 0.02 OrthoFinder output from all 47 species
Ceric.14G043400.1 Ceric.14G043400 histone *(H3) & original description: pacid=50633664... 0.03 OrthoFinder output from all 47 species
Ceric.19G072300.1 Ceric.19G072300 histone *(H3) & original description: pacid=50576158... 0.02 OrthoFinder output from all 47 species
Ceric.24G002400.1 Ceric.24G002400 histone *(H3) & original description: pacid=50629579... 0.03 OrthoFinder output from all 47 species
Ceric.27G025200.1 Ceric.27G025200 histone *(H3) & original description: pacid=50606238... 0.02 OrthoFinder output from all 47 species
Ceric.27G026100.1 Ceric.27G026100 histone *(H3) & original description: pacid=50605944... 0.02 OrthoFinder output from all 47 species
Ceric.27G029400.1 Ceric.27G029400 histone *(H3) & original description: pacid=50605419... 0.02 OrthoFinder output from all 47 species
Ceric.30G057000.1 Ceric.30G057000 histone *(H3) & original description: pacid=50609365... 0.02 OrthoFinder output from all 47 species
Cre06.g267950 No alias Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder output from all 47 species
Cre06.g274000 No alias Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder output from all 47 species
Cre06.g274101 No alias Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder output from all 47 species
Cre06.g274350 No alias Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder output from all 47 species
Cre06.g274850 No alias Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder output from all 47 species
Cre06.g275750 No alias Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder output from all 47 species
Cre06.g276850 No alias Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder output from all 47 species
Cre13.g569950 No alias Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder output from all 47 species
Cre17.g708700 No alias Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder output from all 47 species
Dac_g12416 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g11158 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g27747 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18977 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g27287 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009838001 No alias Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder output from all 47 species
Gb_40804 No alias histone (H3) 0.03 OrthoFinder output from all 47 species
LOC_Os01g64640.1 LOC_Os01g64640 histone (H3) 0.03 OrthoFinder output from all 47 species
LOC_Os04g34240.1 LOC_Os04g34240 histone (H3) 0.02 OrthoFinder output from all 47 species
LOC_Os05g41080.1 LOC_Os05g41080 histone H3 variant (CENH3) 0.02 OrthoFinder output from all 47 species
LOC_Os06g04030.1 LOC_Os06g04030 histone (H3) 0.02 OrthoFinder output from all 47 species
LOC_Os06g06460.1 LOC_Os06g06460 histone (H3) 0.01 OrthoFinder output from all 47 species
LOC_Os11g05730.1 LOC_Os11g05730 histone (H3) 0.02 OrthoFinder output from all 47 species
Len_g06032 No alias histone *(H3) & original description: none 0.01 OrthoFinder output from all 47 species
Len_g16288 No alias histone *(H3) & original description: none 0.01 OrthoFinder output from all 47 species
Len_g19487 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g23375 No alias histone *(H3) & original description: none 0.01 OrthoFinder output from all 47 species
MA_197719g0010 No alias histone (H3) 0.03 OrthoFinder output from all 47 species
MA_475294g0010 No alias histone (H3) 0.01 OrthoFinder output from all 47 species
MA_56411g0010 No alias histone (H3) 0.02 OrthoFinder output from all 47 species
Nbi_g07788 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g07789 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g10158 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g074000.3.1 Solyc01g074000 histone (H3) 0.03 OrthoFinder output from all 47 species
Solyc01g086820.4.1 Solyc01g086820 histone (H3) 0.02 OrthoFinder output from all 47 species
Solyc05g051500.4.1 Solyc05g051500 histone (H3) 0.02 OrthoFinder output from all 47 species
Solyc10g008910.1.1 Solyc10g008910 histone (H3) 0.04 OrthoFinder output from all 47 species
Solyc12g056540.1.1 Solyc12g056540 histone (H3) 0.03 OrthoFinder output from all 47 species
Spa_g42522 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g52114 No alias histone *(H3) & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g04797 No alias histone *(H3) & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e008160_P001 Zm00001e008160 histone (H3) 0.01 OrthoFinder output from all 47 species
Zm00001e016861_P001 Zm00001e016861 histone (H3) 0.02 OrthoFinder output from all 47 species
Zm00001e018263_P001 Zm00001e018263 histone (H3) 0.01 OrthoFinder output from all 47 species
Zm00001e019170_P001 Zm00001e019170 histone (H3) 0.02 OrthoFinder output from all 47 species
Zm00001e029901_P001 Zm00001e029901 histone (H3) 0.03 OrthoFinder output from all 47 species
Zm00001e036599_P001 Zm00001e036599 histone (H3) 0.03 OrthoFinder output from all 47 species
Zm00001e040856_P001 Zm00001e040856 histone (H3) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 1 132
No external refs found!