Aliases : Pp3c20_6220
Description : splicing factor-related
Gene families : OG0000568 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000568_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Pp3c20_6220V3.1 | |
Cluster | HCCA: Cluster_104 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Len_g12745 | No alias | pre-mRNA splicing factor *(SF1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pir_g18388 | No alias | pre-mRNA splicing factor *(SF1) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Sam_g18658 | No alias | pre-mRNA splicing factor *(SF1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Spa_g46185 | No alias | pre-mRNA splicing factor *(SF1) & original description: none | 0.01 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003756 | protein disulfide isomerase activity | IEP | HCCA |
MF | GO:0003774 | cytoskeletal motor activity | IEP | HCCA |
MF | GO:0003777 | microtubule motor activity | IEP | HCCA |
CC | GO:0005783 | endoplasmic reticulum | IEP | HCCA |
CC | GO:0005875 | microtubule associated complex | IEP | HCCA |
BP | GO:0007017 | microtubule-based process | IEP | HCCA |
BP | GO:0007018 | microtubule-based movement | IEP | HCCA |
MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | HCCA |
MF | GO:0016671 | oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | IEP | HCCA |
MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | HCCA |
MF | GO:0016853 | isomerase activity | IEP | HCCA |
MF | GO:0016860 | intramolecular oxidoreductase activity | IEP | HCCA |
MF | GO:0016864 | intramolecular oxidoreductase activity, transposing S-S bonds | IEP | HCCA |
MF | GO:0019239 | deaminase activity | IEP | HCCA |
CC | GO:0030286 | dynein complex | IEP | HCCA |
CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
No external refs found! |