Pp3c20_23190V3.1 (Pp3c20_23190)


Aliases : Pp3c20_23190

Description : disease resistance protein (TIR-NBS-LRR class)


Gene families : OG0011264 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011264_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c20_23190V3.1

Target Alias Description ECC score Gene Family Method Actions
Pp3c10_19140V3.1 Pp3c10_19140 disease resistance protein (TIR-NBS-LRR class) 0.01 OrthoFinder output from all 47 species
Pp3c10_20780V3.1 Pp3c10_20780 disease resistance protein (TIR-NBS-LRR class) 0.05 OrthoFinder output from all 47 species
Pp3c18_22320V3.1 RPP4, Pp3c18_22320 disease resistance protein (TIR-NBS-LRR class) 0.05 OrthoFinder output from all 47 species
Pp3c18_3160V3.1 Pp3c18_3160 No annotation 0.06 OrthoFinder output from all 47 species
Pp3c20_22240V3.1 Pp3c20_22240 disease resistance protein (TIR-NBS-LRR class) 0.05 OrthoFinder output from all 47 species
Pp3c21_3520V3.1 Pp3c21_3520 target of AVRB operation1 0.04 OrthoFinder output from all 47 species
Pp3c23_7327V3.1 Pp3c23_7327 Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
Pp3c25_1370V3.1 Pp3c25_1370 disease resistance protein (TIR-NBS-LRR class) 0.05 OrthoFinder output from all 47 species
Pp3c2_17170V3.1 Pp3c2_17170 disease resistance protein (TIR-NBS-LRR class) 0.06 OrthoFinder output from all 47 species
Pp3c2_24770V3.1 Pp3c2_24770 disease resistance protein (TIR-NBS-LRR class) 0.02 OrthoFinder output from all 47 species
Pp3c2_2580V3.1 Pp3c2_2580 disease resistance protein (TIR-NBS-LRR class) 0.02 OrthoFinder output from all 47 species
Pp3c2_2600V3.1 Pp3c2_2600 No annotation 0.05 OrthoFinder output from all 47 species
Sam_g11354 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0015074 DNA integration IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!