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  5. Pp3c20_2230V3.1

Pp3c20_2230V3.1 (Pp3c20_2230)


Aliases : Pp3c20_2230

Description : No annotation


Gene families : OG0020397 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0020397_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c20_2230V3.1
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
Pp3c11_22180V3.1 Pp3c11_22180 disease resistance protein (TIR-NBS-LRR class) 0.04 OrthoFinder output from all 47 species
Pp3c14_23670V3.1 Pp3c14_23670 No annotation 0.03 OrthoFinder output from all 47 species
Pp3c9_24920V3.1 Pp3c9_24920 Disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
CC GO:0030286 dynein complex IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!