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  5. Pp3c1_6650V3.1

Pp3c1_6650V3.1 (Pp3c1_6650)


Aliases : Pp3c1_6650

Description : Ribosomal protein L22p/L17e family protein


Gene families : OG0001495 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001495_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c1_6650V3.1
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00159640 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 OrthoFinder output from all 47 species
AMTR_s00013p00211990 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
AMTR_s00013p00223470 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
AMTR_s00013p00224030 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 OrthoFinder output from all 47 species
AT1G27400 No alias Ribosomal protein L22p/L17e family protein 0.14 OrthoFinder output from all 47 species
AT1G67430 No alias Ribosomal protein L22p/L17e family protein 0.13 OrthoFinder output from all 47 species
Adi_g041566 No alias component *(uL22) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aev_g23375 No alias component *(uL22) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ala_g34478 No alias component *(uL22) of large ribosomal-subunit (LSU)... 0.1 OrthoFinder output from all 47 species
Aop_g07938 No alias component *(uL22) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aop_g49076 No alias component *(uL22) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Aspi01Gene27569.t1 Aspi01Gene27569 component *(uL22) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Aspi01Gene42009.t1 Aspi01Gene42009 component *(uL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 47 species
Azfi_s0243.g059889 No alias component *(uL22) of large ribosomal-subunit (LSU)... 0.08 OrthoFinder output from all 47 species
Azfi_s0467.g072815 No alias component *(uL22) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Azfi_s0599.g078872 No alias component *(uL22) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Azfi_s2109.g109388 No alias component *(uL22) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Azfi_s2217.g109896 No alias component *(uL22) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Ceric.02G040500.1 Ceric.02G040500 component *(uL22) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Ceric.36G028400.1 Ceric.36G028400 component *(uL22) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001215.8 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.09 OrthoFinder output from all 47 species
Cre13.g568900 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.19 OrthoFinder output from all 47 species
Dac_g15760 No alias component *(uL22) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Dac_g23579 No alias component *(uL22) of large ribosomal-subunit (LSU)... 0.09 OrthoFinder output from all 47 species
Dac_g25427 No alias component *(uL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 47 species
Dcu_g32685 No alias component *(uL22) of large ribosomal-subunit (LSU)... 0.08 OrthoFinder output from all 47 species
Dcu_g43058 No alias component *(uL22) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Dde_g16328 No alias component *(uL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 47 species
GSVIVT01008528001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.15 OrthoFinder output from all 47 species
GSVIVT01010449001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 OrthoFinder output from all 47 species
GSVIVT01010450001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.15 OrthoFinder output from all 47 species
LOC_Os08g41810.1 LOC_Os08g41810 component RPL17 of LSU proteome component 0.09 OrthoFinder output from all 47 species
LOC_Os09g08430.1 LOC_Os09g08430 component RPL17 of LSU proteome component 0.13 OrthoFinder output from all 47 species
Len_g18743 No alias component *(uL22) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Len_g59449 No alias component *(uL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 47 species
Lfl_g31086 No alias component *(uL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 47 species
MA_10430182g0010 No alias component RPL17 of LSU proteome component 0.07 OrthoFinder output from all 47 species
MA_64923g0010 No alias component RPL17 of LSU proteome component 0.12 OrthoFinder output from all 47 species
Mp1g10230.1 No alias component RPL17 of LSU proteome component 0.09 OrthoFinder output from all 47 species
Nbi_g03330 No alias component *(uL22) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Nbi_g27595 No alias component *(uL22) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Pir_g05366 No alias component *(uL22) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Pir_g39286 No alias component *(uL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 47 species
Pir_g58342 No alias component *(uL22) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ppi_g07930 No alias component *(uL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 47 species
Ppi_g27245 No alias component *(uL22) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Ppi_g37392 No alias component *(uL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0129.g021928 No alias component *(uL22) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sam_g00835 No alias component *(uL22) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Sam_g15137 No alias component *(uL22) of large ribosomal-subunit (LSU)... 0.11 OrthoFinder output from all 47 species
Sam_g44519 No alias component *(uL22) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Smo96251 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.09 OrthoFinder output from all 47 species
Solyc03g111230.4.1 Solyc03g111230 component RPL17 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Solyc06g071870.3.1 Solyc06g071870 component RPL17 of LSU proteome component 0.1 OrthoFinder output from all 47 species
Solyc06g071880.4.1 Solyc06g071880 component RPL17 of LSU proteome component 0.09 OrthoFinder output from all 47 species
Spa_g12589 No alias component *(uL22) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Spa_g15052 No alias component *(uL22) of large ribosomal-subunit (LSU)... 0.1 OrthoFinder output from all 47 species
Spa_g51098 No alias component *(uL22) of large ribosomal-subunit (LSU)... 0.09 OrthoFinder output from all 47 species
Spa_g51099 No alias component *(uL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 47 species
Tin_g04902 No alias component *(uL22) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Zm00001e003661_P001 Zm00001e003661 component RPL17 of LSU proteome component 0.14 OrthoFinder output from all 47 species
Zm00001e005470_P001 Zm00001e005470 component RPL17 of LSU proteome component 0.01 OrthoFinder output from all 47 species
Zm00001e021953_P003 Zm00001e021953 component RPL17 of LSU proteome component 0.08 OrthoFinder output from all 47 species
Zm00001e026882_P002 Zm00001e026882 component RPL17 of LSU proteome component 0.07 OrthoFinder output from all 47 species
Zm00001e031261_P001 Zm00001e031261 component RPL17 of LSU proteome component 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001063 Ribosomal_L22 17 152
No external refs found!