Pp3c1_420V3.1 (Pp3c1_420)


Aliases : Pp3c1_420

Description : Ribosomal protein S30 family protein


Gene families : OG0002477 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002477_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c1_420V3.1
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00192320 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.01 OrthoFinder output from all 47 species
AT2G19750 No alias Ribosomal protein S30 family protein 0.03 OrthoFinder output from all 47 species
AT4G29390 No alias Ribosomal protein S30 family protein 0.02 OrthoFinder output from all 47 species
AT5G56670 No alias Ribosomal protein S30 family protein 0.02 OrthoFinder output from all 47 species
Adi_g127141 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Aop_g25271 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Aop_g34461 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Azfi_s0068.g036442 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.11 OrthoFinder output from all 47 species
Ceric.05G056700.1 Ceric.05G056700 component *(eS30) of small ribosomal-subunit (SSU)... 0.1 OrthoFinder output from all 47 species
Ceric.20G020400.1 Ceric.20G020400 component *(eS30) of small ribosomal-subunit (SSU)... 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001003.33 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.08 OrthoFinder output from all 47 species
Cre16.g666301 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.19 OrthoFinder output from all 47 species
Dcu_g30165 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Dcu_g30830 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
GSVIVT01016902001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.08 OrthoFinder output from all 47 species
Gb_16784 No alias component RPS30 of SSU proteome 0.03 OrthoFinder output from all 47 species
Gb_23464 No alias component RPS30 of SSU proteome 0.11 OrthoFinder output from all 47 species
LOC_Os02g56014.1 LOC_Os02g56014 component RPS30 of SSU proteome 0.01 OrthoFinder output from all 47 species
LOC_Os06g07580.1 LOC_Os06g07580 component RPS30 of SSU proteome 0.03 OrthoFinder output from all 47 species
Len_g35390 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Lfl_g16849 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 47 species
MA_10432727g0010 No alias component RPS30 of SSU proteome 0.06 OrthoFinder output from all 47 species
Mp2g24290.1 No alias component RPS30 of SSU proteome 0.09 OrthoFinder output from all 47 species
Mp8g09080.1 No alias component RPS30 of SSU proteome 0.22 OrthoFinder output from all 47 species
Msp_g20473 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 47 species
Nbi_g43255 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g008991 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0211.g025924 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sam_g05835 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Sam_g17534 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sam_g35687 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sam_g37139 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sam_g52915 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Smo227173 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
Solyc08g076340.3.1 Solyc08g076340 component RPS30 of SSU proteome 0.05 OrthoFinder output from all 47 species
Solyc12g008700.3.1 Solyc12g008700 component RPS30 of SSU proteome 0.03 OrthoFinder output from all 47 species
Spa_g34396 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Spa_g45532 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006846 Ribosomal_S30 3 47
No external refs found!