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Aliases : Pp3c1_39470
Description : Ribosomal protein L30/L7 family protein
Gene families : OG0001142 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001142_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Pp3c1_39470V3.1 | |
| Cluster | HCCA: Cluster_141 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00056p00107780 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.06 | OrthoFinder output from all 47 species | |
| AMTR_s00061p00187310 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.06 | OrthoFinder output from all 47 species | |
| AMTR_s00086p00164400 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.06 | OrthoFinder output from all 47 species | |
| AT1G80750 | No alias | Ribosomal protein L30/L7 family protein | 0.01 | OrthoFinder output from all 47 species | |
| AT2G01250 | No alias | Ribosomal protein L30/L7 family protein | 0.25 | OrthoFinder output from all 47 species | |
| Adi_g041735 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Adi_g099683 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g26611 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g00722 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Ala_g30462 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.12 | OrthoFinder output from all 47 species | |
| Als_g10894 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 47 species | |
| Als_g61623 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Aob_g07617 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 47 species | |
| Aop_g10797 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Azfi_s0129.g048841 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.1 | OrthoFinder output from all 47 species | |
| Azfi_s0870.g090589 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.12 | OrthoFinder output from all 47 species | |
| Azfi_s4066.g117878 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g08001 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.11G041100.1 | Ceric.11G041100 | component *(uL30) of large ribosomal-subunit (LSU)... | 0.12 | OrthoFinder output from all 47 species | |
| Ceric.34G033800.1 | Ceric.34G033800 | component *(uL30) of large ribosomal-subunit (LSU)... | 0.15 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020909.42 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.18 | OrthoFinder output from all 47 species | |
| Cre12.g537800 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.23 | OrthoFinder output from all 47 species | |
| Dac_g10886 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.21 | OrthoFinder output from all 47 species | |
| Dcu_g00598 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.08 | OrthoFinder output from all 47 species | |
| Dcu_g33812 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g35020 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g04672 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g06368 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 47 species | |
| Ehy_g21688 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
| GSVIVT01029288001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.21 | OrthoFinder output from all 47 species | |
| GSVIVT01029655001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.16 | OrthoFinder output from all 47 species | |
| Gb_20650 | No alias | component RPL7 of LSU proteome component | 0.15 | OrthoFinder output from all 47 species | |
| LOC_Os04g51630.1 | LOC_Os04g51630 | component RPL7 of LSU proteome component | 0.14 | OrthoFinder output from all 47 species | |
| LOC_Os08g13690.1 | LOC_Os08g13690 | component RPL7 of LSU proteome component | 0.19 | OrthoFinder output from all 47 species | |
| LOC_Os08g42920.1 | LOC_Os08g42920 | component RPL7 of LSU proteome component | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g27660 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g31973 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| MA_10428203g0010 | No alias | component RPL7 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
| MA_109845g0010 | No alias | component RPL7 of LSU proteome component | 0.12 | OrthoFinder output from all 47 species | |
| MA_47548g0010 | No alias | component RPL7 of LSU proteome component | 0.13 | OrthoFinder output from all 47 species | |
| Mp3g13040.1 | No alias | component RPL7 of LSU proteome component | 0.21 | OrthoFinder output from all 47 species | |
| Msp_g04692 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.1 | OrthoFinder output from all 47 species | |
| Msp_g33450 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g21023 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 47 species | |
| Nbi_g34481 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g11275 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g33373 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g11555 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.1 | OrthoFinder output from all 47 species | |
| Pir_g59807 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Pnu_g01037 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g12581 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g20280 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g23835 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.09 | OrthoFinder output from all 47 species | |
| Ppi_g26101 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0059.g015032 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.08 | OrthoFinder output from all 47 species | |
| Sam_g06365 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.08 | OrthoFinder output from all 47 species | |
| Sam_g10126 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.14 | OrthoFinder output from all 47 species | |
| Sam_g10127 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.13 | OrthoFinder output from all 47 species | |
| Sam_g13945 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Sam_g17394 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g27105 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g31082 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Sam_g43550 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 47 species | |
| Sam_g47015 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g49407 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Smo103994 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc06g068400.3.1 | Solyc06g068400 | component RPL7 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
| Solyc08g075090.4.1 | Solyc08g075090 | transcription factor (bHLH). component RPL7 of LSU... | 0.18 | OrthoFinder output from all 47 species | |
| Spa_g07368 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.11 | OrthoFinder output from all 47 species | |
| Spa_g43297 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g21600 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.12 | OrthoFinder output from all 47 species | |
| Zm00001e003731_P002 | Zm00001e003731 | component RPL7 of LSU proteome component | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e007015_P002 | Zm00001e007015 | component RPL7 of LSU proteome component | 0.17 | OrthoFinder output from all 47 species | |
| Zm00001e022294_P001 | Zm00001e022294 | component RPL7 of LSU proteome component | 0.22 | OrthoFinder output from all 47 species | |
| Zm00001e024250_P001 | Zm00001e024250 | component RPL7 of LSU proteome component | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e040072_P002 | Zm00001e040072 | component RPL7 of LSU proteome component | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e041593_P001 | Zm00001e041593 | component RPL7 of LSU proteome component | 0.22 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0019843 | rRNA binding | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| No external refs found! |