1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c1_38560V3.1

Pp3c1_38560V3.1 (RPT3, Pp3c1_38560)


Aliases : RPT3, Pp3c1_38560

Description : regulatory particle triple-A ATPase 3


Gene families : OG0002973 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002973_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c1_38560V3.1
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
Als_g27997 RPT3 regulatory component *(RPT3) of 26S proteasome &... 0.01 OrthoFinder output from all 47 species
Ceric.01G028300.1 RPT3, Ceric.01G028300 regulatory component *(RPT3) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00022075.46 RPT3 26S proteasome regulatory subunit 6B homolog... 0.01 OrthoFinder output from all 47 species
Dde_g19421 RPT3 regulatory component *(RPT3) of 26S proteasome &... 0.01 OrthoFinder output from all 47 species
Msp_g01130 RPT3 regulatory component *(RPT3) of 26S proteasome &... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR032501 Prot_ATP_ID_OB_C 83 138
IPR041569 AAA_lid_3 352 394
IPR003959 ATPase_AAA_core 196 329
No external refs found!