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  5. Pp3c1_3700V3.1

Pp3c1_3700V3.1 (LUG, RON2, Pp3c1_3700)


Aliases : LUG, RON2, Pp3c1_3700

Description : LisH dimerisation motif;WD40/YVTN repeat-like-containing domain


Gene families : OG0000790 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000790_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c1_3700V3.1
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0185.g056657 LUG, RON2 component *(LUG/LUH) of transcriptional co-repressor... 0.01 OrthoFinder output from all 47 species
Lfl_g14945 LUG, RON2 component *(LUG/LUH) of transcriptional co-repressor... 0.02 OrthoFinder output from all 47 species
MA_57453g0010 LUH transcriptional co-repressor (LUG) 0.01 OrthoFinder output from all 47 species
MA_65863g0010 LUH transcriptional co-repressor (LUG) 0.01 OrthoFinder output from all 47 species
MA_99040g0010 LUG, RON2 transcriptional co-repressor (LUG) 0.01 OrthoFinder output from all 47 species
Pnu_g18167 LUG, RON2 component *(LUG/LUH) of transcriptional co-repressor... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0080.g017924 LUG, RON2 component *(LUG/LUH) of transcriptional co-repressor... 0.02 OrthoFinder output from all 47 species
Spa_g40400 LUG, RON2 component *(LUG/LUH) of transcriptional co-repressor... 0.01 OrthoFinder output from all 47 species
Zm00001e020658_P005 LUG, RON2, Zm00001e020658 transcriptional co-repressor (LUG) 0.01 OrthoFinder output from all 47 species
Zm00001e027845_P004 LUG, RON2, Zm00001e027845 transcriptional co-repressor (LUG) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005694 chromosome IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006594 LisH 10 36
IPR001680 WD40_repeat 657 693
IPR001680 WD40_repeat 737 773
IPR001680 WD40_repeat 573 607
IPR001680 WD40_repeat 825 860
IPR001680 WD40_repeat 615 649
No external refs found!