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  5. Pp3c1_36050V3.1

Pp3c1_36050V3.1 (LRS1, Pp3c1_36050)


Aliases : LRS1, Pp3c1_36050

Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG0002511 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002511_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c1_36050V3.1
Cluster HCCA: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
Als_g18784 LRS1 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.01 OrthoFinder output from all 47 species
Ore_g09811 LRS1 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Pir_g09739 LRS1 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.01 OrthoFinder output from all 47 species
Solyc08g023590.4.1 LRS1, Solyc08g023590 Coatomer subunit alpha-2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
CC GO:0030119 AP-type membrane coat adaptor complex IEP HCCA
CC GO:0044599 AP-5 adaptor complex IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR021772 WDR48/Bun107 555 699
IPR001680 WD40_repeat 184 215
IPR001680 WD40_repeat 95 133
No external refs found!