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  5. Pp3c1_33030V3.1

Pp3c1_33030V3.1 (Pp3c1_33030)


Aliases : Pp3c1_33030

Description : No annotation


Gene families : OG0001941 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001941_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c1_33030V3.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g010487 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g070397 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g10479 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01020747001 No alias No description available 0.03 OrthoFinder output from all 47 species
Nbi_g00616 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g35258 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0127.g021811 No alias not classified & original description: CDS=1-261 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR018392 LysM_dom 127 169
No external refs found!