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  5. Pp3c1_27990V3.1

Pp3c1_27990V3.1 (STM, SHM1, SHMT1, Pp3c1_27990)


Aliases : STM, SHM1, SHMT1, Pp3c1_27990

Description : serine transhydroxymethyltransferase 1


Gene families : OG0000518 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000518_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c1_27990V3.1
Cluster HCCA: Cluster_142

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00046p00219150 STM, SHM1,... Photosynthesis.photorespiration.serine hydroxymethyltransferase 0.02 OrthoFinder output from all 47 species
AT4G37930 STM, SHM1, SHMT1 serine transhydroxymethyltransferase 1 0.02 OrthoFinder output from all 47 species
Aev_g09895 STM, SHM1, SHMT1 EC_2.1 transferase transferring one-carbon group &... 0.01 OrthoFinder output from all 47 species
Als_g06300 STM, SHM1, SHMT1 EC_2.1 transferase transferring one-carbon group &... 0.01 OrthoFinder output from all 47 species
Aop_g11376 STM, SHM1, SHMT1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Cba_g12674 STM, SHM1, SHMT1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001130.31 SHM4 Enzyme classification.EC_2 transferases.EC_2.1... 0.02 OrthoFinder output from all 47 species
Dac_g28484 STM, SHM1, SHMT1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
GSVIVT01003859001 STM, SHM1, SHMT1 Photosynthesis.photorespiration.serine hydroxymethyltransferase 0.03 OrthoFinder output from all 47 species
LOC_Os03g52840.1 STM, SHM1,... serine hydroxymethyltransferase 0.02 OrthoFinder output from all 47 species
Len_g12401 STM, SHM1, SHMT1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
MA_99276g0010 STM, SHM1, SHMT1 serine hydroxymethyltransferase 0.01 OrthoFinder output from all 47 species
Mp2g08370.1 STM, SHM1, SHMT1 serine hydroxymethyltransferase 0.03 OrthoFinder output from all 47 species
Msp_g48544 STM, SHM1, SHMT1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Nbi_g03063 STM, SHM1, SHMT1 EC_2.1 transferase transferring one-carbon group &... 0.01 OrthoFinder output from all 47 species
Pir_g00993 STM, SHM1, SHMT1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Sam_g36946 No alias EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Smo270566 STM, SHM1, SHMT1 Photosynthesis.photorespiration.serine hydroxymethyltransferase 0.01 OrthoFinder output from all 47 species
Solyc02g091560.3.1 STM, SHM1,... serine hydroxymethyltransferase 0.03 OrthoFinder output from all 47 species
Tin_g10060 STM, SHM1, SHMT1 EC_2.1 transferase transferring one-carbon group &... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP HCCA
InterPro domains Description Start Stop
IPR039429 SHMT-like_dom 62 459
No external refs found!