AMTR_s00059p00142910 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00059.126

Description : Cytoskeleton.cytoskeleton-plasma membrane-cell wall interface.AT14a integrin-like protein


Gene families : OG_01_0003213 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003213_tree ,
OG_02_0002178 (LandPlants) Phylogenetic Tree(s): OG_02_0002178_tree ,
OG_03_0001968 (SeedPlants) Phylogenetic Tree(s): OG_03_0001968_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00059p00142910
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AT5G66675 No alias Protein of unknown function (DUF677) 0.07 Archaeplastida
GSVIVT01031916001 No alias UPF0496 protein At4g34320 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_12691 No alias integrin-like protein (AT14a) 0.03 Archaeplastida
Gb_12692 No alias integrin-like protein (AT14a) 0.05 Archaeplastida
LOC_Os10g21540.1 No alias integrin-like protein (AT14a) 0.07 Archaeplastida
Smo119515 No alias Cytoskeleton.cytoskeleton-plasma membrane-cell wall... 0.02 Archaeplastida
Solyc11g039740.3.1 No alias integrin-like protein (AT14a) 0.08 Archaeplastida
AT5G66675 No alias Protein of unknown function (DUF677) 0.05 LandPlants
Gb_12691 No alias integrin-like protein (AT14a) 0.02 LandPlants
Gb_12692 No alias integrin-like protein (AT14a) 0.04 LandPlants
LOC_Os10g21540.1 No alias integrin-like protein (AT14a) 0.03 LandPlants
Smo119515 No alias Cytoskeleton.cytoskeleton-plasma membrane-cell wall... 0.02 LandPlants
Solyc11g039740.3.1 No alias integrin-like protein (AT14a) 0.06 LandPlants
AT5G66675 No alias Protein of unknown function (DUF677) 0.02 SeedPlants
Gb_12691 No alias integrin-like protein (AT14a) 0.02 SeedPlants
Gb_12692 No alias integrin-like protein (AT14a) 0.04 SeedPlants
Solyc11g039740.3.1 No alias integrin-like protein (AT14a) 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007749 DUF677 40 364
No external refs found!