Pp3c1_13270V3.1 (Pp3c1_13270)

Aliases : Pp3c1_13270

Description : Ribosomal protein L23/L15e family protein

Gene families : OG0006048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006048_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pp3c1_13270V3.1

Target	Alias	Description	ECC score	Gene Family Method
Aev_g33883	No alias	component *(uL23m) of large mitoribosomal-subunit...	0.01	OrthoFinder output from all 47 species
Azfi_s0024.g020279	No alias	component *(uL23m) of large mitoribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Ceric.03G042300.1	Ceric.03G042300	component *(uL23m) of large mitoribosomal-subunit...	0.02	OrthoFinder output from all 47 species
Cre17.g727350	No alias	Protein biosynthesis.organelle translation...	0.01	OrthoFinder output from all 47 species
Dde_g07488	No alias	component *(uL23m) of large mitoribosomal-subunit...	0.01	OrthoFinder output from all 47 species
GSVIVT01002466001	No alias	Protein biosynthesis.organelle translation...	0.01	OrthoFinder output from all 47 species
LOC_Os07g23244.1	LOC_Os07g23244	component mtRPL23 of large ribosomal subunit proteome	0.01	OrthoFinder output from all 47 species
Lfl_g11751	No alias	component *(uL23m) of large mitoribosomal-subunit...	0.02	OrthoFinder output from all 47 species
Mp1g23410.1	No alias	component mtRPL23 of large ribosomal subunit proteome	0.03	OrthoFinder output from all 47 species
Sam_g28715	No alias	component *(uL23m) of large mitoribosomal-subunit...	0.02	OrthoFinder output from all 47 species
Tin_g22006	No alias	component *(uL23m) of large mitoribosomal-subunit...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0008168	methyltransferase activity	IEP	HCCA
MF	GO:0008641	ubiquitin-like modifier activating enzyme activity	IEP	HCCA
MF	GO:0009055	electron transfer activity	IEP	HCCA
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016877	ligase activity, forming carbon-sulfur bonds	IEP	HCCA
MF	GO:0020037	heme binding	IEP	HCCA
MF	GO:0046906	tetrapyrrole binding	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013025	Ribosomal_L25/23	27	93

External Links

No external refs found!

Pp3c1_13270V3.1 (Pp3c1_13270)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation