Pp3c1_120V3.1 (Pp3c1_120)


Aliases : Pp3c1_120

Description : Ribosomal L22e protein family


Gene families : OG0000309 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0000309_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c1_120V3.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g036416 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Aev_g03619 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Aev_g26156 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Ala_g11886 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Ala_g18322 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 39 species
Als_g38432 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Als_g38436 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 39 species
Als_g44641 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Aob_g00408 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Aop_g10541 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 39 species
Aspi01Gene38161.t1 Aspi01Gene38161 component *(eL22) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Aspi01Gene72593.t1 Aspi01Gene72593 component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Azfi_s0003.g007793 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 39 species
Azfi_s0005.g009357 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 39 species
Cba_g49596 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Ceric.08G045600.1 Ceric.08G045600 component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Ceric.26G014800.1 Ceric.26G014800 component *(eL22) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 39 species
Dac_g04863 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 39 species
Dac_g14500 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Dcu_g18517 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Dcu_g27968 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Ehy_g03143 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
GSVIVT01031130001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.07 OrthoFinder output from all 39 species
GSVIVT01031158001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 39 species
GSVIVT01035141001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 OrthoFinder output from all 39 species
Gb_08874 No alias component RPL22 of LSU proteome component 0.03 OrthoFinder output from all 39 species
Gb_36164 No alias component RPL22 of LSU proteome component 0.05 OrthoFinder output from all 39 species
Len_g02014 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Len_g02481 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 39 species
Lfl_g23822 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Lfl_g27449 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Lfl_g31513 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
MA_130453g0010 No alias component RPL22 of LSU proteome component 0.05 OrthoFinder output from all 39 species
Msp_g03306 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.08 OrthoFinder output from all 39 species
Msp_g20028 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 39 species
Nbi_g07171 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Nbi_g10748 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Ore_g19866 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Ore_g36770 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Pir_g40025 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 39 species
Pir_g51091 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Pnu_g12502 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Pp3c11_680V3.1 Pp3c11_680 Ribosomal L22e protein family 0.02 OrthoFinder output from all 39 species
Pp3c6_5370V3.1 Pp3c6_5370 Ribosomal L22e protein family 0.05 OrthoFinder output from all 39 species
Pp3c7_27030V3.1 Pp3c7_27030 Ribosomal L22e protein family 0.05 OrthoFinder output from all 39 species
Ppi_g23657 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Sacu_v1.1_s0167.g024206 AGL26 component *(eL22) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 39 species
Sacu_v1.1_s0197.g025519 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Sam_g13724 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 39 species
Spa_g05462 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Spa_g22846 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 39 species
Spa_g25050 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Tin_g17980 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Tin_g36488 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0015934 large ribosomal subunit IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR002671 Ribosomal_L22e 14 123
No external refs found!