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  5. Pp3c19_7640V3.1

Pp3c19_7640V3.1 (PTAC5, Pp3c19_7640)


Aliases : PTAC5, Pp3c19_7640

Description : plastid transcriptionally active 5


Gene families : OG0007664 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007664_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c19_7640V3.1

Target Alias Description ECC score Gene Family Method Actions
Cba_g07919 PTAC5 cofactor of plastid-encoded RNA polymerase *(TAC5) &... 0.03 OrthoFinder output from all 47 species
Ceric.04G086900.1 PTAC5, Ceric.04G086900 cofactor of plastid-encoded RNA polymerase *(TAC5) &... 0.01 OrthoFinder output from all 47 species
Dac_g00803 PTAC5 cofactor of plastid-encoded RNA polymerase *(TAC5) &... 0.02 OrthoFinder output from all 47 species
Dcu_g12562 PTAC5 cofactor of plastid-encoded RNA polymerase *(TAC5) &... 0.02 OrthoFinder output from all 47 species
Ehy_g12076 PTAC5 cofactor of plastid-encoded RNA polymerase *(TAC5) &... 0.04 OrthoFinder output from all 47 species
LOC_Os04g43420.1 PTAC5, LOC_Os04g43420 TAC5 cofactor of plastid-encoded RNA polymerase 0.01 OrthoFinder output from all 47 species
MA_692g0010 PTAC5 TAC5 cofactor of plastid-encoded RNA polymerase 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0123.g021497 PTAC5 cofactor of plastid-encoded RNA polymerase *(TAC5) &... 0.01 OrthoFinder output from all 47 species
Sam_g06443 No alias cofactor of plastid-encoded RNA polymerase *(TAC5) &... 0.01 OrthoFinder output from all 47 species
Smo404832 PTAC5 RNA biosynthesis.organelle machineries.RNA polymerase... 0.02 OrthoFinder output from all 47 species
Solyc09g091830.4.1 PTAC5, Solyc09g091830 TAC5 cofactor of plastid-encoded RNA polymerase 0.03 OrthoFinder output from all 47 species
Spa_g18327 PTAC5 cofactor of plastid-encoded RNA polymerase *(TAC5) &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002477 Peptidoglycan-bd-like 218 276
No external refs found!