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  5. Pp3c19_427V3.1

Pp3c19_427V3.1 (Pp3c19_427)


Aliases : Pp3c19_427

Description : No annotation


Gene families : OG0011440 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011440_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c19_427V3.1
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
Pp3c11_26910V3.1 Pp3c11_26910 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.03 OrthoFinder output from all 47 species
Pp3c11_300V3.1 Pp3c11_300 CCCH-type zinc finger family protein 0.03 OrthoFinder output from all 47 species
Pp3c13_30V3.1 Pp3c13_30 No annotation 0.05 OrthoFinder output from all 47 species
Pp3c15_40V3.1 Pp3c15_40 No annotation 0.05 OrthoFinder output from all 47 species
Pp3c16_20630V3.1 Pp3c16_20630 CCCH-type zinc finger family protein 0.01 OrthoFinder output from all 47 species
Pp3c19_23020V3.1 Pp3c19_23020 No annotation 0.04 OrthoFinder output from all 47 species
Pp3c23_220V3.1 Pp3c23_220 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.03 OrthoFinder output from all 47 species
Pp3c5_29008V3.1 Pp3c5_29008 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.03 OrthoFinder output from all 47 species
Pp3c5_29184V3.1 Pp3c5_29184 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c8_221V3.1 Pp3c8_221 No annotation 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!