Mp7g00250.1


Description : RNA helicase (Brr2)


Gene families : OG_01_0000989 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000989_tree ,
OG_02_0001451 (LandPlants) Phylogenetic Tree(s): OG_02_0001451_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp7g00250.1
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00114710 evm_27.TU.AmTr_v1... RNA processing.RNA splicing.spliceosome... 0.02 Archaeplastida
AMTR_s00110p00146400 evm_27.TU.AmTr_v1... DExH-box ATP-dependent RNA helicase DExH14... 0.05 Archaeplastida
AT5G61140 No alias U5 small nuclear ribonucleoprotein helicase 0.03 Archaeplastida
Cre17.g744147 No alias RNA processing.RNA splicing.spliceosome... 0.02 Archaeplastida
GSVIVT01007875001 No alias DExH-box ATP-dependent RNA helicase DExH14... 0.03 Archaeplastida
GSVIVT01010769001 No alias DExH-box ATP-dependent RNA helicase DExH12... 0.02 Archaeplastida
Gb_18049 No alias DExH-box ATP-dependent RNA helicase DExH14... 0.04 Archaeplastida
Gb_27895 No alias RNA helicase (Brr2) 0.02 Archaeplastida
LOC_Os03g11470.1 No alias DExH-box ATP-dependent RNA helicase DExH14... 0.03 Archaeplastida
MA_10429486g0010 No alias DExH-box ATP-dependent RNA helicase DExH14... 0.04 Archaeplastida
MA_10434882g0010 No alias DExH-box ATP-dependent RNA helicase DExH14... 0.03 Archaeplastida
MA_81219g0020 No alias DExH-box ATP-dependent RNA helicase DExH12... 0.04 Archaeplastida
MA_81219g0030 No alias DExH-box ATP-dependent RNA helicase DExH12... 0.04 Archaeplastida
Pp3c1_35880V3.1 No alias U5 small nuclear ribonucleoprotein helicase, putative 0.02 Archaeplastida
Pp3c2_9850V3.1 No alias U5 small nuclear ribonucleoprotein helicase 0.06 Archaeplastida
Smo178863 No alias DExH-box ATP-dependent RNA helicase DExH14... 0.02 Archaeplastida
Smo410613 No alias DExH-box ATP-dependent RNA helicase DExH14... 0.02 Archaeplastida
Zm00001e038727_P001 No alias DExH-box ATP-dependent RNA helicase DExH14... 0.04 Archaeplastida
AMTR_s00110p00146400 evm_27.TU.AmTr_v1... DExH-box ATP-dependent RNA helicase DExH14... 0.04 LandPlants
AT5G61140 No alias U5 small nuclear ribonucleoprotein helicase 0.03 LandPlants
GSVIVT01007875001 No alias DExH-box ATP-dependent RNA helicase DExH14... 0.02 LandPlants
Gb_18049 No alias DExH-box ATP-dependent RNA helicase DExH14... 0.04 LandPlants
LOC_Os03g11470.1 No alias DExH-box ATP-dependent RNA helicase DExH14... 0.03 LandPlants
MA_10429486g0010 No alias DExH-box ATP-dependent RNA helicase DExH14... 0.04 LandPlants
MA_10434882g0010 No alias DExH-box ATP-dependent RNA helicase DExH14... 0.02 LandPlants
MA_81219g0020 No alias DExH-box ATP-dependent RNA helicase DExH12... 0.02 LandPlants
MA_81219g0030 No alias DExH-box ATP-dependent RNA helicase DExH12... 0.03 LandPlants
Pp3c2_9850V3.1 No alias U5 small nuclear ribonucleoprotein helicase 0.05 LandPlants
Smo178863 No alias DExH-box ATP-dependent RNA helicase DExH14... 0.02 LandPlants
Smo410613 No alias DExH-box ATP-dependent RNA helicase DExH14... 0.02 LandPlants

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 1115 1280
IPR004179 Sec63-dom 1597 1909
IPR001650 Helicase_C 1393 1478
IPR001650 Helicase_C 497 641
IPR011545 DEAD/DEAH_box_helicase_dom 266 439
IPR004179 Sec63-dom 765 1071
No external refs found!