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  5. Pp3c18_6360V3.1

Pp3c18_6360V3.1 (4CL3, Pp3c18_6360)


Aliases : 4CL3, Pp3c18_6360

Description : 4-coumarate:CoA ligase 3


Gene families : OG0000673 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000673_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c18_6360V3.1
Cluster HCCA: Cluster_124

Target Alias Description ECC score Gene Family Method Actions
Adi_g103472 AT4CL2, 4CL2 EC_6.2 ligase forming carbon-sulfur bond & original... 0.01 OrthoFinder output from all 47 species
Dac_g07445 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.02 OrthoFinder output from all 47 species
Dde_g17060 4CL1, AT4CL1, 4CL.1 EC_6.2 ligase forming carbon-sulfur bond & original... 0.02 OrthoFinder output from all 47 species
LOC_Os04g24530.1 ACOS5, LOC_Os04g24530 acyl-CoA synthetase (ACS5) 0.01 OrthoFinder output from all 47 species
Spa_g12933 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.01 OrthoFinder output from all 47 species
Zm00001e008138_P001 ACOS5, Zm00001e008138 acyl-CoA synthetase (ACS5) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004096 catalase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig_com 87 491
IPR025110 AMP-bd_C 500 575
No external refs found!