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  5. Pp3c18_16640V3.1

Pp3c18_16640V3.1 (ABI3, SIS10, Pp3c18_16640)


Aliases : ABI3, SIS10, Pp3c18_16640

Description : AP2/B3-like transcriptional factor family protein


Gene families : OG0001487 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001487_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c18_16640V3.1
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
AT1G28300 LEC2 AP2/B3-like transcriptional factor family protein 0.01 OrthoFinder output from all 47 species
AT3G24650 ABI3, SIS10 AP2/B3-like transcriptional factor family protein 0.01 OrthoFinder output from all 47 species
AT3G26790 FUS3 AP2/B3-like transcriptional factor family protein 0.02 OrthoFinder output from all 47 species
Aspi01Gene00966.t1 ABI3, SIS10,... transcription factor *(ABI3) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene00966.t3 ABI3, SIS10,... transcription factor *(ABI3) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01028540001 ABI3, SIS10 RNA biosynthesis.transcriptional activation.B3... 0.02 OrthoFinder output from all 47 species
Gb_01768 ABI3, SIS10 transcription factor (LAV-ABI3) 0.01 OrthoFinder output from all 47 species
MA_216909g0010 FUS3 transcription factor (LAV-ABI3) 0.01 OrthoFinder output from all 47 species
Ore_g18873 ABI3, SIS10 transcription factor *(ABI3) & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g26812 ABI3, SIS10 transcription factor *(ABI3) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013060 ABI3, SIS10 transcription factor *(ABI3) & original description: CDS=1-2232 0.01 OrthoFinder output from all 47 species
Solyc02g094460.2.1 FUS3, Solyc02g094460 transcription factor (LAV-ABI3) 0.01 OrthoFinder output from all 47 species
Solyc06g083600.3.1 ABI3, SIS10,... transcription factor (LAV-ABI3) 0.02 OrthoFinder output from all 47 species
Zm00001e018872_P002 ABI3, SIS10,... transcription factor (LAV-ABI3) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 292 378
No external refs found!