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  5. Pp3c17_3620V3.1

Pp3c17_3620V3.1 (Pp3c17_3620)


Aliases : Pp3c17_3620

Description : GDSL-like Lipase/Acylhydrolase superfamily protein


Gene families : OG0000049 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c17_3620V3.1
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
Adi_g013152 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g072378 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g12219 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g12011 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g29400 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dac_g19754 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dac_g34801 GLIP6 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g48631 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g14107 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01000005001 No alias GDSL esterase/lipase At1g54790 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Gb_16377 No alias GDSL esterase/lipase At1g28650 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_16378 No alias GDSL esterase/lipase At1g28650 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Gb_41416 No alias GDSL esterase/lipase At1g28650 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
MA_42044g0010 No alias GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Nbi_g00794 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g25777 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g01991 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0242.g026640 No alias not classified & original description: CDS=1-513 0.01 OrthoFinder output from all 47 species
Solyc05g050210.4.1 Solyc05g050210 GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc12g017460.1.1 Solyc12g017460 GDSL esterase/lipase At1g28590 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Zm00001e012850_P001 Zm00001e012850 GDSL esterase/lipase At1g28590 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Zm00001e016450_P001 Zm00001e016450 GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e027859_P002 Zm00001e027859 GDSL esterase/lipase At2g27360 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Zm00001e031624_P002 Zm00001e031624 GDSL esterase/lipase At1g54790 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016788 hydrolase activity, acting on ester bonds IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR001087 GDSL 9 169
No external refs found!