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  5. Pp3c17_350V3.1

Pp3c17_350V3.1 (AGO1, Pp3c17_350)


Aliases : AGO1, Pp3c17_350

Description : Stabilizer of iron transporter SufD / Polynucleotidyl transferase


Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c17_350V3.1
Cluster HCCA: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00114260 AGO2,... Chromatin organisation.DNA methylation.canonical... 0.01 OrthoFinder output from all 47 species
AT5G21030 No alias PAZ domain-containing protein / piwi domain-containing protein 0.01 OrthoFinder output from all 47 species
Ala_g33064 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.02 OrthoFinder output from all 47 species
Als_g13739 AGO1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g40616 AGO1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g41650 PNH, AGO10, ZLL not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g11029 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.02 OrthoFinder output from all 47 species
Aob_g22649 AGO7, ZIP not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28463.t1 AGO1, Aspi01Gene28463 regulatory protein *(AGO7) of transacting siRNA pathway... 0.03 OrthoFinder output from all 47 species
Aspi01Gene61220.t1 AGO1, Aspi01Gene61220 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene62001.t1 AGO3, Aspi01Gene62001 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g34642 AGO1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g73083 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.01 OrthoFinder output from all 47 species
Dac_g09447 AGO4, OCP11 siRNA-integrating factor *(AGO) & original description: none 0.01 OrthoFinder output from all 47 species
Dac_g22733 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.01 OrthoFinder output from all 47 species
Dcu_g16878 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g06133 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.01 OrthoFinder output from all 47 species
GSVIVT01001941001 AGO4, OCP11 Chromatin organisation.DNA methylation.canonical... 0.02 OrthoFinder output from all 47 species
GSVIVT01030512001 AGO6 Chromatin organisation.DNA methylation.canonical... 0.01 OrthoFinder output from all 47 species
GSVIVT01031430001 AGO5 Chromatin organisation.DNA methylation.canonical... 0.01 OrthoFinder output from all 47 species
GSVIVT01033726001 AGO5 Chromatin organisation.DNA methylation.canonical... 0.01 OrthoFinder output from all 47 species
LOC_Os02g40320.1 PNH, AGO10, ZLL,... Protein argonaute MEL1 OS=Oryza sativa subsp. japonica... 0.01 OrthoFinder output from all 47 species
LOC_Os03g57540.1 LOC_Os03g57540 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os06g51310.2 AGO1, LOC_Os06g51310 RIS-Complex miRNA recruiting factor (AGO1) 0.01 OrthoFinder output from all 47 species
Len_g08893 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.01 OrthoFinder output from all 47 species
Len_g35246 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g03429 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.02 OrthoFinder output from all 47 species
Lfl_g08087 AGO1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
MA_10122566g0010 PNH, AGO10, ZLL Protein argonaute 10 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10427420g0010 AGO1 Protein argonaute PNH1 OS=Oryza sativa subsp. japonica... 0.01 OrthoFinder output from all 47 species
MA_10429131g0010 AGO1 Protein argonaute 1B OS=Oryza sativa subsp. japonica... 0.01 OrthoFinder output from all 47 species
MA_18547g0010 AGO1 Protein argonaute 1A OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
MA_243101g0010 AGO1 Protein argonaute 1 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
MA_47087g0010 AGO4, OCP11 Protein argonaute 7 OS=Oryza sativa subsp. japonica... 0.01 OrthoFinder output from all 47 species
MA_71066g0010 AGO4, OCP11 Protein argonaute 4B OS=Oryza sativa subsp. japonica... 0.01 OrthoFinder output from all 47 species
Mp1g18110.1 AGO1 RIS-Complex miRNA recruiting factor (AGO1) 0.02 OrthoFinder output from all 47 species
Msp_g13472 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.01 OrthoFinder output from all 47 species
Msp_g48817 PNH, AGO10, ZLL not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g16802 AGO5 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g15671 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0026.g009481 AGO1 not classified & original description: CDS=370-3495 0.01 OrthoFinder output from all 47 species
Solyc02g069280.2.1 AGO2, Solyc02g069280 siRNA-binding factor (AGO2) of non-canonical RdDM pathway 0.01 OrthoFinder output from all 47 species
Solyc03g098280.4.1 AGO1, Solyc03g098280 RIS-Complex miRNA recruiting factor (AGO1) 0.01 OrthoFinder output from all 47 species
Solyc03g111760.3.1 AGO4, OCP11,... Protein argonaute 4A OS=Oryza sativa subsp. japonica... 0.01 OrthoFinder output from all 47 species
Solyc06g072300.4.1 AGO1, Solyc06g072300 RIS-Complex miRNA recruiting factor (AGO1) 0.01 OrthoFinder output from all 47 species
Spa_g23108 AGO9 siRNA-integrating factor *(AGO) & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g08802 AGO1 regulatory protein *(AGO7) of transacTing siRNA pathway... 0.02 OrthoFinder output from all 47 species
Tin_g17474 AGO1 miRNA recruiTing factor (AGO) of RNA-induced silencing... 0.01 OrthoFinder output from all 47 species
Tin_g39101 AGO1 regulatory protein *(AGO7) of transacTing siRNA pathway... 0.01 OrthoFinder output from all 47 species
Zm00001e037347_P002 PNH, AGO10, ZLL,... RIS-Complex miRNA recruiting factor (AGO1) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003100 PAZ_dom 641 748
IPR014811 ArgoL1 576 618
IPR003165 Piwi 927 1267
No external refs found!