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Aliases : Pp3c17_19960
Description : No annotation
Gene families : OG0000080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000080_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Pp3c17_19960V3.1 | |
| Cluster | HCCA: Cluster_104 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00024p00137930 | MYB54, ATMYB54,... | RNA biosynthesis.transcriptional activation.MYB... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00186p00015620 | BW52, ATMYB52,... | RNA biosynthesis.transcriptional activation.MYB... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G14350 | AtMYB124, MYB124, FLP | Duplicated homeodomain-like superfamily protein | 0.01 | OrthoFinder output from all 47 species | |
| AT1G26780 | AtMYB117, LOF1, MYB117 | myb domain protein 117 | 0.02 | OrthoFinder output from all 47 species | |
| AT1G73410 | MYB54, ATMYB54 | myb domain protein 54 | 0.02 | OrthoFinder output from all 47 species | |
| AT2G02820 | MYB88, AtMYB88 | myb domain protein 88 | 0.02 | OrthoFinder output from all 47 species | |
| AT3G29020 | MYB110, AtMYB110 | myb domain protein 110 | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g007057 | MYB73, ATMYB73 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Adi_g109382 | MYB77 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g15763 | MYB3R-1,... | R1R2R3-MYB transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Azfi_s0007.g010866 | MYB1, AtMYB1 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0179.g056258 | MYB3R-1,... | R1R2R3-MYB transcription factor & original description:... | 0.01 | OrthoFinder output from all 47 species | |
| Cba_g03902 | MYBR1, MYB44,... | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.06G009000.1 | ATMYB101,... | not classified & original description: pacid=50620364... | 0.02 | OrthoFinder output from all 47 species | |
| Cre02.g103450 | MYB88, AtMYB88 | RNA biosynthesis.transcriptional activation.MYB... | 0.01 | OrthoFinder output from all 47 species | |
| Cre12.g522400 | ATMYB3R5, MYB3R-5 | RNA biosynthesis.transcriptional activation.MYB... | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g02281 | ATMYB3R5, MYB3R-5 | R1R2R3-MYB transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01000219001 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01008484001 | MYB54, ATMYB54 | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_24073 | MYB77 | transcription factor (MYB) | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os03g51110.1 | BW52, ATMYB52,... | transcription factor (MYB) | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os06g43090.1 | MYBR1, MYB44,... | transcription factor (MYB) | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os11g10130.1 | BW52, ATMYB52,... | transcription factor (MYB) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g10129 | MYB56, AtMYB56 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.01 | OrthoFinder output from all 47 species | |
| Lfl_g25897 | MYB77 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_34970g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Mp3g09350.1 | AtMYB98, MYB98 | transcription factor (MYB) | 0.02 | OrthoFinder output from all 47 species | |
| Mp5g14610.1 | MYB77 | transcription factor (MYB) | 0.01 | OrthoFinder output from all 47 species | |
| Mp8g11870.1 | AtMYB117, LOF1, MYB117 | transcription factor (MYB) | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g11561 | MYB77 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g32001 | LOF2, MYB105, ATMYB105 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g05843 | MYBR1, MYB44,... | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g42000 | MYBR1, MYB44,... | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.01 | OrthoFinder output from all 47 species | |
| Pir_g45930 | MYB88, AtMYB88 | MYB class-R2R3 transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0226.g026344 | MYB70, AtMYB70 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.01 | OrthoFinder output from all 47 species | |
| Sam_g12139 | No alias | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.01 | OrthoFinder output from all 47 species | |
| Smo75978 | ATMYB3R5, MYB3R-5 | RNA biosynthesis.transcriptional activation.MYB... | 0.01 | OrthoFinder output from all 47 species | |
| Solyc03g098270.1.1 | LOF2, MYB105,... | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc05g007870.3.1 | LOF2, MYB105,... | transcription factor (MYB) | 0.01 | OrthoFinder output from all 47 species | |
| Solyc06g071520.1.1 | AtMYB98, MYB98,... | transcription factor (MYB) | 0.01 | OrthoFinder output from all 47 species | |
| Spa_g16125 | LOF2, MYB105, ATMYB105 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.01 | OrthoFinder output from all 47 species | |
| Spa_g39803 | ATMYB3R5, MYB3R-5 | R1R2R3-MYB transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g41684 | LOF2, MYB105, ATMYB105 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.01 | OrthoFinder output from all 47 species | |
| Spa_g55381 | LOF2, MYB105, ATMYB105 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e005507_P001 | BW52, ATMYB52,... | transcription factor (MYB) | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e018391_P001 | MYB54, ATMYB54,... | transcription factor (MYB) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e030480_P001 | MYBR1, MYB44,... | transcription factor (MYB) | 0.01 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000160 | phosphorelay signal transduction system | IEP | HCCA |
| BP | GO:0007165 | signal transduction | IEP | HCCA |
| BP | GO:0035556 | intracellular signal transduction | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |