Pp3c17_1970V3.1 (Pp3c17_1970)

Aliases : Pp3c17_1970

Description : No annotation

Gene families : OG0000220 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000220_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pp3c17_1970V3.1

Target	Alias	Description	ECC score	Gene Family Method
Aev_g45777	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene16688.t2	Aspi01Gene16688	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene18126.t1	Aspi01Gene18126	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.1Z068300.1	Ceric.1Z068300	not classified & original description: pacid=50597142...	0.03	OrthoFinder output from all 47 species
Ceric.1Z068500.1	Ceric.1Z068500	heavy chain of Dynein microtubule-based motor protein...	0.03	OrthoFinder output from all 47 species
Ceric.25G018200.1	Ceric.25G018200	not classified & original description: pacid=50594702...	0.01	OrthoFinder output from all 47 species
Ceric.25G028800.1	Ceric.25G028800	heavy chain of Dynein microtubule-based motor protein...	0.04	OrthoFinder output from all 47 species
Ceric.29G018300.1	Ceric.29G018300	heavy chain of Dynein microtubule-based motor protein...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000042.101	No alias	Dynein beta chain, flagellar outer arm OS=Chlamydomonas...	0.01	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000142.6	No alias	No description available	0.01	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000142.7	No alias	Cytoskeleton.microtubular network.Dynein...	0.01	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000142.8	No alias	RNA processing.RNA splicing.U2-type-intron-specific...	0.01	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000169.13	No alias	Dynein-1-beta heavy chain, flagellar inner arm I1...	0.01	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000194.64	No alias	Dynein-1-alpha heavy chain, flagellar inner arm I1...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000248.41	No alias	Dynein-1-alpha heavy chain, flagellar inner arm I1...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000404.38	No alias	Cytoskeleton.microtubular network.Dynein...	0.01	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000828.12	No alias	Cytoskeleton.microtubular network.Dynein...	0.01	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001206.27	No alias	Dynein-1-alpha heavy chain, flagellar inner arm I1...	0.01	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001206.30	No alias	Dynein-1-beta heavy chain, flagellar inner arm I1...	0.01	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020684.47	ACBP4	Cytoskeleton.microtubular network.Dynein...	0.01	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021017.28	No alias	Dynein gamma chain, flagellar outer arm OS=Chlamydomonas...	0.01	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00022075.30	No alias	Cytoskeleton.microtubular network.Dynein...	0.02	OrthoFinder output from all 47 species
Cre02.g141606	No alias	Cytoskeleton.microtubular network.Dynein...	0.01	OrthoFinder output from all 47 species
Cre03.g145127	No alias	Cytoskeleton.microtubular network.Dynein...	0.03	OrthoFinder output from all 47 species
Cre09.g392282	No alias	Cytoskeleton.microtubular network.Dynein...	0.03	OrthoFinder output from all 47 species
Cre09.g403800	No alias	Cytoskeleton.microtubular network.Dynein...	0.03	OrthoFinder output from all 47 species
Cre11.g476050	No alias	Cytoskeleton.microtubular network.Dynein...	0.03	OrthoFinder output from all 47 species
Cre12.g484250	No alias	Cytoskeleton.microtubular network.Dynein...	0.02	OrthoFinder output from all 47 species
Cre14.g624950	No alias	Cytoskeleton.microtubular network.Dynein...	0.02	OrthoFinder output from all 47 species
Cre14.g627576	No alias	Cytoskeleton.microtubular network.Dynein...	0.02	OrthoFinder output from all 47 species
Cre16.g685450	No alias	Cytoskeleton.microtubular network.Dynein...	0.02	OrthoFinder output from all 47 species
Gb_31253	No alias	Dynein-1-beta heavy chain, flagellar inner arm I1...	0.01	OrthoFinder output from all 47 species
Mp2g07870.1	No alias	heavy chain of Dynein microtubule-based motor protein complex	0.01	OrthoFinder output from all 47 species
Pnu_g23794	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0060.g015235	No alias	heavy chain of Dynein microtubule-based motor protein...	0.01	OrthoFinder output from all 47 species
Smo76047	No alias	Cytoskeleton.microtubular network.Dynein...	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003774	cytoskeletal motor activity	None	Extended
MF	GO:0003777	microtubule motor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005875	microtubule associated complex	None	Extended
BP	GO:0007017	microtubule-based process	None	Extended
BP	GO:0007018	microtubule-based movement	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
CC	GO:0030286	dynein complex	IEA	Interproscan
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
CC	GO:1902494	catalytic complex	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0008092	cytoskeletal protein binding	IEP	HCCA
MF	GO:0015631	tubulin binding	IEP	HCCA
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	HCCA
MF	GO:0019239	deaminase activity	IEP	HCCA
CC	GO:0032993	protein-DNA complex	IEP	HCCA
MF	GO:0043015	gamma-tubulin binding	IEP	HCCA
CC	GO:0044815	DNA packaging complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR041466	Dynein_AAA5_ext	1245	1361
IPR035706	AAA_9	2359	2579
IPR041658	AAA_lid_11	2946	3109
IPR024317	Dynein_heavy_chain_D4_dom	1725	1986
IPR013602	Dynein_heavy_linker	213	616
IPR035699	AAA_6	750	1077
IPR041228	Dynein_C	3117	3414
IPR004273	Dynein_heavy_D6_P-loop	2825	2945
IPR041589	DNAH3_AAA_lid_1	1579	1667
IPR024743	Dynein_HC_stalk	2000	2332

External Links

No external refs found!

Pp3c17_1970V3.1 (Pp3c17_1970)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation