Aliases : Os05g0162000
Description : 20.2.2 stress.abiotic.cold Encodes a cold-inducible cationic peroxidase that is involved in the stress response. In response to low temperature, RCI3 transcripts accumulate in the aerial part and in roots of etiolated seedlings but only in roots of light-grown seedlings. RARE COLD INDUCIBLE GENE 3 (RCI3)
Gene families : OG_01_0011798 (Gene family) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR network (cutoff 100): LOC_Os05g06970 | |
Cluster | HCCA cluster: Cluster_14 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Zm00001d037547 | GRMZM2G135108 | 26.12 misc.peroxidases Peroxidase superfamily protein | 0.05 | Gene family | |
Zm00001d037550 | GRMZM2G450233 | 20.2.2 stress.abiotic.cold Encodes a cold-inducible... | 0.03 | Gene family |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004601 | peroxidase activity | IEA | InterProScan |
BP | GO:0006979 | response to oxidative stress | IEA | InterProScan |
MF | GO:0020037 | heme binding | IEA | InterProScan |
BP | GO:0055114 | oxidation-reduction process | IEA | InterProScan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002016 | Haem_peroxidase | 43 | 295 |
No external refs found! |