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  5. LOC_Os05g06970

LOC_Os05g06970 (Os05g0162000)


Aliases : Os05g0162000

Description : 20.2.2 stress.abiotic.cold Encodes a cold-inducible cationic peroxidase that is involved in the stress response. In response to low temperature, RCI3 transcripts accumulate in the aerial part and in roots of etiolated seedlings but only in roots of light-grown seedlings. RARE COLD INDUCIBLE GENE 3 (RCI3)


Gene families : OG_01_0011798 (Gene family) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os05g06970
Cluster HCCA cluster: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
Zm00001d037547 GRMZM2G135108 26.12 misc.peroxidases Peroxidase superfamily protein 0.05 Gene family
Zm00001d037550 GRMZM2G450233 20.2.2 stress.abiotic.cold Encodes a cold-inducible... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEA InterProScan
BP GO:0006979 response to oxidative stress IEA InterProScan
MF GO:0020037 heme binding IEA InterProScan
BP GO:0055114 oxidation-reduction process IEA InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002016 Haem_peroxidase 43 295
No external refs found!