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  5. Pp3c16_6000V3.1

Pp3c16_6000V3.1 (Pp3c16_6000)


Aliases : Pp3c16_6000

Description : No annotation


Gene families : OG0013063 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0013063_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c16_6000V3.1
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
Pp3c11_16242V3.1 Pp3c11_16242 No annotation 0.04 OrthoFinder output from all 47 species
Pp3c11_17090V3.1 Pp3c11_17090 No annotation 0.05 OrthoFinder output from all 47 species
Pp3c13_7500V3.1 Pp3c13_7500 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c15_8000V3.1 Pp3c15_8000 No annotation 0.03 OrthoFinder output from all 47 species
Pp3c15_8010V3.1 Pp3c15_8010 No annotation 0.04 OrthoFinder output from all 47 species
Pp3c18_1210V3.1 Pp3c18_1210 No annotation 0.06 OrthoFinder output from all 47 species
Pp3c22_7125V3.1 Pp3c22_7125 No annotation 0.05 OrthoFinder output from all 47 species
Pp3c2_17850V3.1 Pp3c2_17850 No annotation 0.03 OrthoFinder output from all 47 species
Pp3c3_29690V3.1 Pp3c3_29690 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c3_29700V3.1 Pp3c3_29700 No annotation 0.04 OrthoFinder output from all 47 species
Pp3c9_12650V3.1 Pp3c9_12650 No annotation 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!