Pp3c16_13520V3.1 (Pp3c16_13520)

Aliases : Pp3c16_13520

Description : pumilio 2

Gene families : OG0000583 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000583_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pp3c16_13520V3.1

Target	Alias	Description	ECC score	Gene Family Method
Ala_g10258	APUM2, PUM2	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Ala_g16848	PUM1, APUM1	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Azfi_s0205.g057726	APUM2, PUM2	not classified & original description: CDS=300-3455	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001065.15	PUM5, APUM5	No description available	0.02	OrthoFinder output from all 47 species
LOC_Os02g57390.1	PUM1, APUM1,...	Pumilio homolog 1 OS=Arabidopsis thaliana...	0.01	OrthoFinder output from all 47 species
LOC_Os05g01910.1	PUM1, APUM1,...	Pumilio homolog 2 OS=Arabidopsis thaliana...	0.01	OrthoFinder output from all 47 species
Zm00001e027653_P001	PUM1, APUM1,...	Pumilio homolog 2 OS=Arabidopsis thaliana...	0.01	OrthoFinder output from all 47 species
Zm00001e029661_P001	APUM2, PUM2,...	Pumilio homolog 2 OS=Arabidopsis thaliana...	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001313	Pumilio_RNA-bd_rpt	3	31

External Links

No external refs found!