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  5. Pp3c15_6140V3.1

Pp3c15_6140V3.1 (PKL, GYM, CHR6, SSL2,...)


Aliases : PKL, GYM, CHR6, SSL2, CHD3, Pp3c15_6140

Description : chromatin remodeling factor CHD3 (PICKLE)


Gene families : OG0000102 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000102_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Pp3c15_6140V3.1
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00173840 CHR17,... Chromatin organisation.chromatin remodeling... 0.01 OrthoFinder output from all 47 species
Aspi01Gene62384.t1 PKR1, CHR4,... CHD3-type chromatin remodeling factor *(PKL/PKR) &... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020960.24 CHR5 Protein CHROMATIN REMODELING 5 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Mp5g24460.1 PKL, GYM, CHR6,... chromatin remodeling factor (Chd3/Mi-2) 0.01 OrthoFinder output from all 47 species
Sam_g29220 No alias component *(CHR5) of SAGA transcription co-activator... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000330 SNF2_N 569 746
IPR023780 Chromo_domain 480 528
IPR001650 Helicase_C 849 959
No external refs found!