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  5. Pp3c15_23380V3.1

Pp3c15_23380V3.1 (Pp3c15_23380)


Aliases : Pp3c15_23380

Description : DNA-directed RNA polymerases


Gene families : OG0005678 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005678_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c15_23380V3.1

Target Alias Description ECC score Gene Family Method Actions
AT1G75670 No alias DNA-directed RNA polymerases 0.02 OrthoFinder output from all 47 species
Cre02.g086750 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os12g34854.1 LOC_Os12g34854 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g17466 No alias component *(NRPA7) of RNA polymerase I complex &... 0.02 OrthoFinder output from all 47 species
Sam_g08529 No alias component *(NRPA7) of RNA polymerase I complex &... 0.02 OrthoFinder output from all 47 species
Solyc05g054140.3.1 Solyc05g054140 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!