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  5. Pp3c15_18420V3.1

Pp3c15_18420V3.1 (Pp3c15_18420)


Aliases : Pp3c15_18420

Description : No annotation


Gene families : OG0000009 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c15_18420V3.1
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
Adi_g033095 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g29144 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_27233 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_29919 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g10351 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c12_4930V3.1 Pp3c12_4930 No annotation 0.06 OrthoFinder output from all 47 species
Pp3c1_3840V3.1 Pp3c1_3840 No annotation 0.03 OrthoFinder output from all 47 species
Pp3c3_24160V3.1 Pp3c3_24160 No annotation 0.03 OrthoFinder output from all 47 species
Pp3c3_24330V3.1 Pp3c3_24330 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c8_380V3.1 Pp3c8_380 No annotation 0.03 OrthoFinder output from all 47 species
Sam_g32107 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39416 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA

No InterPro domains available for this sequence

No external refs found!